Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6231 | 18916;18917;18918 | chr2:178729465;178729464;178729463 | chr2:179594192;179594191;179594190 |
N2AB | 5914 | 17965;17966;17967 | chr2:178729465;178729464;178729463 | chr2:179594192;179594191;179594190 |
N2A | 4987 | 15184;15185;15186 | chr2:178729465;178729464;178729463 | chr2:179594192;179594191;179594190 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.174 | N | 0.523 | 0.26 | 0.252681307341 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79913E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0864 | likely_benign | 0.0917 | benign | -0.747 | Destabilizing | 0.174 | N | 0.523 | neutral | N | 0.502924892 | None | None | N |
T/C | 0.4107 | ambiguous | 0.4761 | ambiguous | -0.447 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
T/D | 0.4148 | ambiguous | 0.4511 | ambiguous | -0.324 | Destabilizing | 0.826 | D | 0.65 | neutral | None | None | None | None | N |
T/E | 0.3044 | likely_benign | 0.3385 | benign | -0.26 | Destabilizing | 0.404 | N | 0.609 | neutral | None | None | None | None | N |
T/F | 0.1794 | likely_benign | 0.2021 | benign | -0.556 | Destabilizing | 0.826 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/G | 0.2564 | likely_benign | 0.2768 | benign | -1.074 | Destabilizing | 0.575 | D | 0.659 | neutral | None | None | None | None | N |
T/H | 0.1686 | likely_benign | 0.1971 | benign | -1.275 | Destabilizing | 0.991 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/I | 0.1243 | likely_benign | 0.1464 | benign | 0.054 | Stabilizing | 0.007 | N | 0.395 | neutral | N | 0.49227983 | None | None | N |
T/K | 0.1364 | likely_benign | 0.1501 | benign | -0.765 | Destabilizing | 0.01 | N | 0.397 | neutral | None | None | None | None | N |
T/L | 0.0825 | likely_benign | 0.0916 | benign | 0.054 | Stabilizing | 0.189 | N | 0.579 | neutral | None | None | None | None | N |
T/M | 0.0788 | likely_benign | 0.0824 | benign | 0.119 | Stabilizing | 0.947 | D | 0.665 | neutral | None | None | None | None | N |
T/N | 0.1122 | likely_benign | 0.124 | benign | -0.847 | Destabilizing | 0.782 | D | 0.568 | neutral | N | 0.497355485 | None | None | N |
T/P | 0.5838 | likely_pathogenic | 0.5822 | pathogenic | -0.179 | Destabilizing | 0.879 | D | 0.681 | prob.neutral | D | 0.545680769 | None | None | N |
T/Q | 0.1688 | likely_benign | 0.1857 | benign | -0.828 | Destabilizing | 0.826 | D | 0.668 | neutral | None | None | None | None | N |
T/R | 0.1077 | likely_benign | 0.1142 | benign | -0.676 | Destabilizing | 0.704 | D | 0.652 | neutral | None | None | None | None | N |
T/S | 0.0992 | likely_benign | 0.1081 | benign | -1.102 | Destabilizing | 0.038 | N | 0.401 | neutral | N | 0.486070887 | None | None | N |
T/V | 0.117 | likely_benign | 0.1382 | benign | -0.179 | Destabilizing | 0.189 | N | 0.533 | neutral | None | None | None | None | N |
T/W | 0.4598 | ambiguous | 0.4864 | ambiguous | -0.6 | Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/Y | 0.2242 | likely_benign | 0.2505 | benign | -0.339 | Destabilizing | 0.906 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.