Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6233 | 18922;18923;18924 | chr2:178729459;178729458;178729457 | chr2:179594186;179594185;179594184 |
N2AB | 5916 | 17971;17972;17973 | chr2:178729459;178729458;178729457 | chr2:179594186;179594185;179594184 |
N2A | 4989 | 15190;15191;15192 | chr2:178729459;178729458;178729457 | chr2:179594186;179594185;179594184 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.966 | N | 0.654 | 0.377 | 0.76439084235 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4207 | ambiguous | 0.475 | ambiguous | -2.392 | Highly Destabilizing | 0.525 | D | 0.507 | neutral | None | None | None | None | N |
L/C | 0.5018 | ambiguous | 0.5524 | ambiguous | -1.688 | Destabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | N |
L/D | 0.8534 | likely_pathogenic | 0.875 | pathogenic | -2.633 | Highly Destabilizing | 0.842 | D | 0.638 | neutral | None | None | None | None | N |
L/E | 0.4143 | ambiguous | 0.4497 | ambiguous | -2.486 | Highly Destabilizing | 0.728 | D | 0.632 | neutral | None | None | None | None | N |
L/F | 0.0965 | likely_benign | 0.1126 | benign | -1.489 | Destabilizing | 0.728 | D | 0.537 | neutral | None | None | None | None | N |
L/G | 0.6714 | likely_pathogenic | 0.6989 | pathogenic | -2.861 | Highly Destabilizing | 0.728 | D | 0.609 | neutral | None | None | None | None | N |
L/H | 0.1954 | likely_benign | 0.2262 | benign | -2.249 | Highly Destabilizing | 0.037 | N | 0.483 | neutral | None | None | None | None | N |
L/I | 0.1275 | likely_benign | 0.14 | benign | -1.075 | Destabilizing | 0.915 | D | 0.486 | neutral | None | None | None | None | N |
L/K | 0.214 | likely_benign | 0.2414 | benign | -1.791 | Destabilizing | 0.728 | D | 0.583 | neutral | None | None | None | None | N |
L/M | 0.0967 | likely_benign | 0.1066 | benign | -0.99 | Destabilizing | 0.989 | D | 0.569 | neutral | N | 0.497268449 | None | None | N |
L/N | 0.4935 | ambiguous | 0.5412 | ambiguous | -1.936 | Destabilizing | 0.842 | D | 0.633 | neutral | None | None | None | None | N |
L/P | 0.9814 | likely_pathogenic | 0.9802 | pathogenic | -1.491 | Destabilizing | 0.966 | D | 0.654 | neutral | N | 0.497486939 | None | None | N |
L/Q | 0.1129 | likely_benign | 0.1293 | benign | -1.937 | Destabilizing | 0.267 | N | 0.441 | neutral | N | 0.512525903 | None | None | N |
L/R | 0.1561 | likely_benign | 0.1677 | benign | -1.352 | Destabilizing | 0.934 | D | 0.626 | neutral | N | 0.489553043 | None | None | N |
L/S | 0.3722 | ambiguous | 0.4326 | ambiguous | -2.591 | Highly Destabilizing | 0.067 | N | 0.444 | neutral | None | None | None | None | N |
L/T | 0.2779 | likely_benign | 0.3198 | benign | -2.319 | Highly Destabilizing | 0.728 | D | 0.545 | neutral | None | None | None | None | N |
L/V | 0.1162 | likely_benign | 0.1301 | benign | -1.491 | Destabilizing | 0.801 | D | 0.518 | neutral | N | 0.51389134 | None | None | N |
L/W | 0.1769 | likely_benign | 0.1756 | benign | -1.821 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
L/Y | 0.2175 | likely_benign | 0.2485 | benign | -1.554 | Destabilizing | 0.067 | N | 0.324 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.