Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6243 | 18952;18953;18954 | chr2:178729429;178729428;178729427 | chr2:179594156;179594155;179594154 |
N2AB | 5926 | 18001;18002;18003 | chr2:178729429;178729428;178729427 | chr2:179594156;179594155;179594154 |
N2A | 4999 | 15220;15221;15222 | chr2:178729429;178729428;178729427 | chr2:179594156;179594155;179594154 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs764402049 | -0.01 | 0.959 | N | 0.275 | 0.176 | 0.216624796971 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs764402049 | -0.01 | 0.959 | N | 0.275 | 0.176 | 0.216624796971 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
K/E | rs764402049 | -0.01 | 0.959 | N | 0.275 | 0.176 | 0.216624796971 | gnomAD-4.0.0 | 5.12524E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.35977E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3322 | likely_benign | 0.4481 | ambiguous | -0.092 | Destabilizing | 0.079 | N | 0.18 | neutral | None | None | None | None | N |
K/C | 0.7912 | likely_pathogenic | 0.8537 | pathogenic | -0.561 | Destabilizing | 0.999 | D | 0.292 | neutral | None | None | None | None | N |
K/D | 0.4529 | ambiguous | 0.6075 | pathogenic | -0.339 | Destabilizing | 0.969 | D | 0.361 | neutral | None | None | None | None | N |
K/E | 0.1623 | likely_benign | 0.2492 | benign | -0.365 | Destabilizing | 0.959 | D | 0.275 | neutral | N | 0.461304862 | None | None | N |
K/F | 0.8119 | likely_pathogenic | 0.8864 | pathogenic | -0.501 | Destabilizing | 0.982 | D | 0.336 | neutral | None | None | None | None | N |
K/G | 0.3373 | likely_benign | 0.4496 | ambiguous | -0.178 | Destabilizing | 0.939 | D | 0.351 | neutral | None | None | None | None | N |
K/H | 0.3822 | ambiguous | 0.4767 | ambiguous | -0.273 | Destabilizing | 0.999 | D | 0.315 | neutral | None | None | None | None | N |
K/I | 0.4622 | ambiguous | 0.5794 | pathogenic | 0.052 | Stabilizing | 0.852 | D | 0.411 | neutral | N | 0.46335189 | None | None | N |
K/L | 0.4363 | ambiguous | 0.5483 | ambiguous | 0.052 | Stabilizing | 0.046 | N | 0.263 | neutral | None | None | None | None | N |
K/M | 0.3343 | likely_benign | 0.4288 | ambiguous | -0.204 | Destabilizing | 0.982 | D | 0.309 | neutral | None | None | None | None | N |
K/N | 0.3903 | ambiguous | 0.5442 | ambiguous | -0.124 | Destabilizing | 0.959 | D | 0.303 | neutral | N | 0.487472743 | None | None | N |
K/P | 0.4301 | ambiguous | 0.5511 | ambiguous | 0.024 | Stabilizing | 0.991 | D | 0.351 | neutral | None | None | None | None | N |
K/Q | 0.1408 | likely_benign | 0.1817 | benign | -0.258 | Destabilizing | 0.996 | D | 0.29 | neutral | N | 0.49482279 | None | None | N |
K/R | 0.0793 | likely_benign | 0.0833 | benign | -0.233 | Destabilizing | 0.959 | D | 0.279 | neutral | N | 0.439969585 | None | None | N |
K/S | 0.3513 | ambiguous | 0.4856 | ambiguous | -0.476 | Destabilizing | 0.759 | D | 0.283 | neutral | None | None | None | None | N |
K/T | 0.2211 | likely_benign | 0.322 | benign | -0.4 | Destabilizing | 0.134 | N | 0.246 | neutral | N | 0.470311135 | None | None | N |
K/V | 0.407 | ambiguous | 0.5155 | ambiguous | 0.024 | Stabilizing | 0.759 | D | 0.304 | neutral | None | None | None | None | N |
K/W | 0.7597 | likely_pathogenic | 0.8244 | pathogenic | -0.614 | Destabilizing | 0.999 | D | 0.315 | neutral | None | None | None | None | N |
K/Y | 0.6741 | likely_pathogenic | 0.7677 | pathogenic | -0.275 | Destabilizing | 0.997 | D | 0.331 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.