Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6247 | 18964;18965;18966 | chr2:178729417;178729416;178729415 | chr2:179594144;179594143;179594142 |
N2AB | 5930 | 18013;18014;18015 | chr2:178729417;178729416;178729415 | chr2:179594144;179594143;179594142 |
N2A | 5003 | 15232;15233;15234 | chr2:178729417;178729416;178729415 | chr2:179594144;179594143;179594142 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs2079986312 | None | 0.915 | N | 0.602 | 0.455 | 0.872719117219 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/W | rs2079986312 | None | 0.915 | N | 0.602 | 0.455 | 0.872719117219 | gnomAD-4.0.0 | 2.56276E-06 | None | None | None | None | N | None | 1.69205E-05 | 0 | None | 0 | 2.42507E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1778 | likely_benign | 0.2155 | benign | -1.741 | Destabilizing | 0.035 | N | 0.439 | neutral | None | None | None | None | N |
L/C | 0.4312 | ambiguous | 0.4877 | ambiguous | -1.282 | Destabilizing | 0.824 | D | 0.574 | neutral | None | None | None | None | N |
L/D | 0.6623 | likely_pathogenic | 0.7059 | pathogenic | -0.729 | Destabilizing | 0.555 | D | 0.638 | neutral | None | None | None | None | N |
L/E | 0.3289 | likely_benign | 0.3486 | ambiguous | -0.695 | Destabilizing | 0.555 | D | 0.639 | neutral | None | None | None | None | N |
L/F | 0.0981 | likely_benign | 0.1121 | benign | -1.258 | Destabilizing | None | N | 0.271 | neutral | N | 0.454233401 | None | None | N |
L/G | 0.4101 | ambiguous | 0.4738 | ambiguous | -2.095 | Highly Destabilizing | 0.149 | N | 0.628 | neutral | None | None | None | None | N |
L/H | 0.1855 | likely_benign | 0.2053 | benign | -1.276 | Destabilizing | 0.935 | D | 0.627 | neutral | None | None | None | None | N |
L/I | 0.0772 | likely_benign | 0.0846 | benign | -0.828 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | N |
L/K | 0.2142 | likely_benign | 0.2392 | benign | -1.04 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
L/M | 0.0771 | likely_benign | 0.0866 | benign | -0.743 | Destabilizing | 0.002 | N | 0.172 | neutral | N | 0.474280599 | None | None | N |
L/N | 0.3482 | ambiguous | 0.4126 | ambiguous | -0.909 | Destabilizing | 0.555 | D | 0.637 | neutral | None | None | None | None | N |
L/P | 0.3848 | ambiguous | 0.4054 | ambiguous | -1.101 | Destabilizing | 0.791 | D | 0.638 | neutral | None | None | None | None | N |
L/Q | 0.1329 | likely_benign | 0.1455 | benign | -1.02 | Destabilizing | 0.38 | N | 0.613 | neutral | None | None | None | None | N |
L/R | 0.1684 | likely_benign | 0.1737 | benign | -0.55 | Destabilizing | 0.38 | N | 0.613 | neutral | None | None | None | None | N |
L/S | 0.2032 | likely_benign | 0.2418 | benign | -1.657 | Destabilizing | 0.117 | N | 0.553 | neutral | D | 0.530347313 | None | None | N |
L/T | 0.1542 | likely_benign | 0.1899 | benign | -1.485 | Destabilizing | 0.149 | N | 0.498 | neutral | None | None | None | None | N |
L/V | 0.0734 | likely_benign | 0.0791 | benign | -1.101 | Destabilizing | None | N | 0.112 | neutral | N | 0.468677205 | None | None | N |
L/W | 0.2032 | likely_benign | 0.213 | benign | -1.29 | Destabilizing | 0.915 | D | 0.602 | neutral | N | 0.502586178 | None | None | N |
L/Y | 0.2571 | likely_benign | 0.3008 | benign | -1.056 | Destabilizing | 0.235 | N | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.