Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6250 | 18973;18974;18975 | chr2:178729408;178729407;178729406 | chr2:179594135;179594134;179594133 |
N2AB | 5933 | 18022;18023;18024 | chr2:178729408;178729407;178729406 | chr2:179594135;179594134;179594133 |
N2A | 5006 | 15241;15242;15243 | chr2:178729408;178729407;178729406 | chr2:179594135;179594134;179594133 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs952849958 | -0.342 | None | N | 0.135 | 0.15 | 0.159798565429 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
R/K | rs952849958 | -0.342 | None | N | 0.135 | 0.15 | 0.159798565429 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/K | rs952849958 | -0.342 | None | N | 0.135 | 0.15 | 0.159798565429 | gnomAD-4.0.0 | 4.95807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08616E-06 | 2.19563E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1298 | likely_benign | 0.1423 | benign | -0.158 | Destabilizing | 0.016 | N | 0.315 | neutral | None | None | None | None | N |
R/C | 0.1477 | likely_benign | 0.1764 | benign | -0.155 | Destabilizing | 0.864 | D | 0.203 | neutral | None | None | None | None | N |
R/D | 0.2016 | likely_benign | 0.2353 | benign | 0.024 | Stabilizing | 0.038 | N | 0.317 | neutral | None | None | None | None | N |
R/E | 0.1332 | likely_benign | 0.1467 | benign | 0.095 | Stabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | N |
R/F | 0.2805 | likely_benign | 0.3102 | benign | -0.317 | Destabilizing | 0.12 | N | 0.281 | neutral | None | None | None | None | N |
R/G | 0.0872 | likely_benign | 0.0919 | benign | -0.38 | Destabilizing | 0.024 | N | 0.3 | neutral | N | 0.433242053 | None | None | N |
R/H | 0.0769 | likely_benign | 0.0835 | benign | -0.832 | Destabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
R/I | 0.1227 | likely_benign | 0.1344 | benign | 0.401 | Stabilizing | 0.295 | N | 0.273 | neutral | N | 0.423987852 | None | None | N |
R/K | 0.0682 | likely_benign | 0.0752 | benign | -0.149 | Destabilizing | None | N | 0.135 | neutral | N | 0.377116625 | None | None | N |
R/L | 0.1308 | likely_benign | 0.139 | benign | 0.401 | Stabilizing | 0.072 | N | 0.315 | neutral | None | None | None | None | N |
R/M | 0.1177 | likely_benign | 0.1269 | benign | 0.066 | Stabilizing | 0.628 | D | 0.263 | neutral | None | None | None | None | N |
R/N | 0.1745 | likely_benign | 0.2085 | benign | 0.236 | Stabilizing | 0.001 | N | 0.173 | neutral | None | None | None | None | N |
R/P | 0.4233 | ambiguous | 0.4335 | ambiguous | 0.235 | Stabilizing | 0.356 | N | 0.293 | neutral | None | None | None | None | N |
R/Q | 0.074 | likely_benign | 0.0785 | benign | 0.068 | Stabilizing | 0.038 | N | 0.226 | neutral | None | None | None | None | N |
R/S | 0.1429 | likely_benign | 0.1576 | benign | -0.252 | Destabilizing | 0.012 | N | 0.291 | neutral | N | 0.426121293 | None | None | N |
R/T | 0.0773 | likely_benign | 0.084 | benign | -0.038 | Destabilizing | 0.055 | N | 0.293 | neutral | N | 0.444264337 | None | None | N |
R/V | 0.1572 | likely_benign | 0.1774 | benign | 0.235 | Stabilizing | 0.072 | N | 0.313 | neutral | None | None | None | None | N |
R/W | 0.1289 | likely_benign | 0.1299 | benign | -0.261 | Destabilizing | 0.864 | D | 0.202 | neutral | None | None | None | None | N |
R/Y | 0.2101 | likely_benign | 0.2382 | benign | 0.129 | Stabilizing | 0.001 | N | 0.254 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.