Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6260 | 19003;19004;19005 | chr2:178729378;178729377;178729376 | chr2:179594105;179594104;179594103 |
N2AB | 5943 | 18052;18053;18054 | chr2:178729378;178729377;178729376 | chr2:179594105;179594104;179594103 |
N2A | 5016 | 15271;15272;15273 | chr2:178729378;178729377;178729376 | chr2:179594105;179594104;179594103 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.004 | N | 0.29 | 0.054 | 0.0482279557977 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs375652574 | -0.147 | 0.638 | N | 0.462 | 0.132 | None | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 4.71E-05 | 0 |
K/Q | rs375652574 | -0.147 | 0.638 | N | 0.462 | 0.132 | None | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.0295E-04 | 0 | 0 |
K/Q | rs375652574 | -0.147 | 0.638 | N | 0.462 | 0.132 | None | gnomAD-4.0.0 | 5.70167E-05 | None | None | None | None | N | None | 0 | 1.6675E-05 | None | 0 | 0 | None | 0 | 0 | 7.71422E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1865 | likely_benign | 0.2127 | benign | -0.206 | Destabilizing | 0.399 | N | 0.459 | neutral | None | None | None | None | N |
K/C | 0.5991 | likely_pathogenic | 0.6158 | pathogenic | -0.195 | Destabilizing | 0.982 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/D | 0.3031 | likely_benign | 0.3533 | ambiguous | 0.146 | Stabilizing | 0.539 | D | 0.457 | neutral | None | None | None | None | N |
K/E | 0.1359 | likely_benign | 0.1594 | benign | 0.176 | Stabilizing | 0.201 | N | 0.458 | neutral | N | 0.469137699 | None | None | N |
K/F | 0.6545 | likely_pathogenic | 0.6541 | pathogenic | -0.321 | Destabilizing | 0.947 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/G | 0.2212 | likely_benign | 0.2438 | benign | -0.459 | Destabilizing | 0.25 | N | 0.491 | neutral | None | None | None | None | N |
K/H | 0.2117 | likely_benign | 0.217 | benign | -0.84 | Destabilizing | 0.826 | D | 0.525 | neutral | None | None | None | None | N |
K/I | 0.3995 | ambiguous | 0.4062 | ambiguous | 0.394 | Stabilizing | 0.826 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/L | 0.3267 | likely_benign | 0.3294 | benign | 0.394 | Stabilizing | 0.7 | D | 0.494 | neutral | None | None | None | None | N |
K/M | 0.2198 | likely_benign | 0.2356 | benign | 0.354 | Stabilizing | 0.976 | D | 0.508 | neutral | N | 0.477799295 | None | None | N |
K/N | 0.1938 | likely_benign | 0.2285 | benign | 0.152 | Stabilizing | 0.004 | N | 0.29 | neutral | N | 0.453626742 | None | None | N |
K/P | 0.7015 | likely_pathogenic | 0.6779 | pathogenic | 0.223 | Stabilizing | 0.826 | D | 0.535 | neutral | None | None | None | None | N |
K/Q | 0.105 | likely_benign | 0.1121 | benign | -0.037 | Destabilizing | 0.638 | D | 0.462 | neutral | N | 0.485531303 | None | None | N |
K/R | 0.0718 | likely_benign | 0.0707 | benign | -0.124 | Destabilizing | 0.002 | N | 0.331 | neutral | N | 0.455285754 | None | None | N |
K/S | 0.2115 | likely_benign | 0.235 | benign | -0.438 | Destabilizing | 0.25 | N | 0.435 | neutral | None | None | None | None | N |
K/T | 0.1461 | likely_benign | 0.153 | benign | -0.236 | Destabilizing | 0.334 | N | 0.465 | neutral | N | 0.487320815 | None | None | N |
K/V | 0.3166 | likely_benign | 0.3259 | benign | 0.223 | Stabilizing | 0.7 | D | 0.634 | neutral | None | None | None | None | N |
K/W | 0.6764 | likely_pathogenic | 0.6637 | pathogenic | -0.258 | Destabilizing | 0.982 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/Y | 0.4513 | ambiguous | 0.4604 | ambiguous | 0.081 | Stabilizing | 0.826 | D | 0.656 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.