Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6262 | 19009;19010;19011 | chr2:178729372;178729371;178729370 | chr2:179594099;179594098;179594097 |
N2AB | 5945 | 18058;18059;18060 | chr2:178729372;178729371;178729370 | chr2:179594099;179594098;179594097 |
N2A | 5018 | 15277;15278;15279 | chr2:178729372;178729371;178729370 | chr2:179594099;179594098;179594097 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs757214692 | -0.515 | 0.003 | N | 0.158 | 0.336 | 0.195762928549 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22792E-04 | None | 0 | None | 0 | 0 | 0 |
D/G | rs757214692 | -0.515 | 0.003 | N | 0.158 | 0.336 | 0.195762928549 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.86698E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs757214692 | -0.515 | 0.003 | N | 0.158 | 0.336 | 0.195762928549 | gnomAD-4.0.0 | 2.56301E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.8506E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2446 | likely_benign | 0.2776 | benign | -0.477 | Destabilizing | 0.007 | N | 0.233 | neutral | N | 0.514356353 | None | None | N |
D/C | 0.7374 | likely_pathogenic | 0.78 | pathogenic | -0.128 | Destabilizing | 0.987 | D | 0.447 | neutral | None | None | None | None | N |
D/E | 0.1434 | likely_benign | 0.1632 | benign | -0.762 | Destabilizing | 0.007 | N | 0.193 | neutral | N | 0.440973315 | None | None | N |
D/F | 0.5447 | ambiguous | 0.599 | pathogenic | -0.32 | Destabilizing | 0.953 | D | 0.449 | neutral | None | None | None | None | N |
D/G | 0.2837 | likely_benign | 0.308 | benign | -0.804 | Destabilizing | 0.003 | N | 0.158 | neutral | N | 0.473741882 | None | None | N |
D/H | 0.3525 | ambiguous | 0.3964 | ambiguous | -0.709 | Destabilizing | 0.939 | D | 0.362 | neutral | D | 0.528499086 | None | None | N |
D/I | 0.358 | ambiguous | 0.4171 | ambiguous | 0.375 | Stabilizing | 0.91 | D | 0.459 | neutral | None | None | None | None | N |
D/K | 0.5059 | ambiguous | 0.5462 | ambiguous | -0.437 | Destabilizing | 0.59 | D | 0.317 | neutral | None | None | None | None | N |
D/L | 0.354 | ambiguous | 0.4018 | ambiguous | 0.375 | Stabilizing | 0.59 | D | 0.431 | neutral | None | None | None | None | N |
D/M | 0.5907 | likely_pathogenic | 0.6473 | pathogenic | 0.896 | Stabilizing | 0.996 | D | 0.434 | neutral | None | None | None | None | N |
D/N | 0.1341 | likely_benign | 0.1465 | benign | -0.825 | Destabilizing | 0.028 | N | 0.249 | neutral | N | 0.486612391 | None | None | N |
D/P | 0.8998 | likely_pathogenic | 0.9007 | pathogenic | 0.117 | Stabilizing | 0.953 | D | 0.359 | neutral | None | None | None | None | N |
D/Q | 0.3913 | ambiguous | 0.4332 | ambiguous | -0.67 | Destabilizing | 0.835 | D | 0.341 | neutral | None | None | None | None | N |
D/R | 0.5545 | ambiguous | 0.6033 | pathogenic | -0.346 | Destabilizing | 0.91 | D | 0.414 | neutral | None | None | None | None | N |
D/S | 0.1579 | likely_benign | 0.1724 | benign | -1.018 | Destabilizing | 0.373 | N | 0.318 | neutral | None | None | None | None | N |
D/T | 0.3064 | likely_benign | 0.3502 | ambiguous | -0.753 | Destabilizing | 0.742 | D | 0.314 | neutral | None | None | None | None | N |
D/V | 0.2624 | likely_benign | 0.307 | benign | 0.117 | Stabilizing | 0.521 | D | 0.415 | neutral | N | 0.458196426 | None | None | N |
D/W | 0.913 | likely_pathogenic | 0.9286 | pathogenic | -0.238 | Destabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
D/Y | 0.2857 | likely_benign | 0.3157 | benign | -0.128 | Destabilizing | 0.979 | D | 0.447 | neutral | N | 0.486150537 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.