Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6265 | 19018;19019;19020 | chr2:178729363;178729362;178729361 | chr2:179594090;179594089;179594088 |
N2AB | 5948 | 18067;18068;18069 | chr2:178729363;178729362;178729361 | chr2:179594090;179594089;179594088 |
N2A | 5021 | 15286;15287;15288 | chr2:178729363;178729362;178729361 | chr2:179594090;179594089;179594088 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1403981596 | -1.004 | 0.928 | D | 0.771 | 0.849 | 0.718210980111 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
D/G | rs1403981596 | -1.004 | 0.928 | D | 0.771 | 0.849 | 0.718210980111 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
D/H | rs764050491 | -0.48 | 0.997 | D | 0.819 | 0.732 | 0.711559257315 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88288E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8817 | likely_pathogenic | 0.8529 | pathogenic | 0.529 | Stabilizing | 0.957 | D | 0.826 | deleterious | D | 0.632032093 | None | None | N |
D/C | 0.9645 | likely_pathogenic | 0.9525 | pathogenic | 0.453 | Stabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
D/E | 0.646 | likely_pathogenic | 0.6216 | pathogenic | -0.609 | Destabilizing | 0.039 | N | 0.353 | neutral | D | 0.618748705 | None | None | N |
D/F | 0.9816 | likely_pathogenic | 0.9777 | pathogenic | 0.992 | Stabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
D/G | 0.926 | likely_pathogenic | 0.9021 | pathogenic | 0.041 | Stabilizing | 0.928 | D | 0.771 | deleterious | D | 0.657539844 | None | None | N |
D/H | 0.9081 | likely_pathogenic | 0.8885 | pathogenic | 0.533 | Stabilizing | 0.997 | D | 0.819 | deleterious | D | 0.586002771 | None | None | N |
D/I | 0.9578 | likely_pathogenic | 0.9506 | pathogenic | 1.846 | Stabilizing | 0.992 | D | 0.871 | deleterious | None | None | None | None | N |
D/K | 0.9711 | likely_pathogenic | 0.9642 | pathogenic | 0.266 | Stabilizing | 0.968 | D | 0.805 | deleterious | None | None | None | None | N |
D/L | 0.9573 | likely_pathogenic | 0.9544 | pathogenic | 1.846 | Stabilizing | 0.983 | D | 0.877 | deleterious | None | None | None | None | N |
D/M | 0.9738 | likely_pathogenic | 0.9719 | pathogenic | 2.332 | Highly Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
D/N | 0.668 | likely_pathogenic | 0.6073 | pathogenic | -0.593 | Destabilizing | 0.978 | D | 0.783 | deleterious | D | 0.604879547 | None | None | N |
D/P | 0.995 | likely_pathogenic | 0.9942 | pathogenic | 1.437 | Stabilizing | 0.992 | D | 0.821 | deleterious | None | None | None | None | N |
D/Q | 0.9292 | likely_pathogenic | 0.9138 | pathogenic | -0.16 | Destabilizing | 0.968 | D | 0.795 | deleterious | None | None | None | None | N |
D/R | 0.974 | likely_pathogenic | 0.9702 | pathogenic | 0.074 | Stabilizing | 0.983 | D | 0.867 | deleterious | None | None | None | None | N |
D/S | 0.7993 | likely_pathogenic | 0.7487 | pathogenic | -0.897 | Destabilizing | 0.895 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/T | 0.9348 | likely_pathogenic | 0.9187 | pathogenic | -0.431 | Destabilizing | 0.983 | D | 0.819 | deleterious | None | None | None | None | N |
D/V | 0.8972 | likely_pathogenic | 0.8813 | pathogenic | 1.437 | Stabilizing | 0.978 | D | 0.877 | deleterious | D | 0.657943452 | None | None | N |
D/W | 0.9971 | likely_pathogenic | 0.9967 | pathogenic | 0.887 | Stabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
D/Y | 0.9128 | likely_pathogenic | 0.8957 | pathogenic | 1.226 | Stabilizing | 0.999 | D | 0.877 | deleterious | D | 0.641722287 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.