Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6268 | 19027;19028;19029 | chr2:178729354;178729353;178729352 | chr2:179594081;179594080;179594079 |
N2AB | 5951 | 18076;18077;18078 | chr2:178729354;178729353;178729352 | chr2:179594081;179594080;179594079 |
N2A | 5024 | 15295;15296;15297 | chr2:178729354;178729353;178729352 | chr2:179594081;179594080;179594079 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1378963436 | -0.334 | 0.015 | N | 0.423 | 0.355 | 0.505765104075 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.98E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1378963436 | -0.334 | 0.015 | N | 0.423 | 0.355 | 0.505765104075 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.77145E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1951 | likely_benign | 0.1663 | benign | -0.816 | Destabilizing | 0.334 | N | 0.622 | neutral | N | 0.507854455 | None | None | N |
E/C | 0.8507 | likely_pathogenic | 0.8167 | pathogenic | -0.295 | Destabilizing | 0.982 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/D | 0.0831 | likely_benign | 0.0841 | benign | -1.016 | Destabilizing | 0.002 | N | 0.389 | neutral | N | 0.487729899 | None | None | N |
E/F | 0.6097 | likely_pathogenic | 0.5665 | pathogenic | -0.6 | Destabilizing | 0.826 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/G | 0.2401 | likely_benign | 0.2007 | benign | -1.139 | Destabilizing | 0.334 | N | 0.649 | neutral | N | 0.511522947 | None | None | N |
E/H | 0.4652 | ambiguous | 0.3989 | ambiguous | -0.961 | Destabilizing | 0.947 | D | 0.646 | neutral | None | None | None | None | N |
E/I | 0.2407 | likely_benign | 0.2182 | benign | 0.048 | Stabilizing | 0.539 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/K | 0.2043 | likely_benign | 0.1645 | benign | -0.397 | Destabilizing | 0.334 | N | 0.602 | neutral | N | 0.494269083 | None | None | N |
E/L | 0.3262 | likely_benign | 0.2937 | benign | 0.048 | Stabilizing | 0.25 | N | 0.654 | neutral | None | None | None | None | N |
E/M | 0.3924 | ambiguous | 0.3552 | ambiguous | 0.561 | Stabilizing | 0.947 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/N | 0.1876 | likely_benign | 0.1669 | benign | -0.768 | Destabilizing | 0.539 | D | 0.646 | neutral | None | None | None | None | N |
E/P | 0.642 | likely_pathogenic | 0.5548 | ambiguous | -0.219 | Destabilizing | 0.826 | D | 0.747 | deleterious | None | None | None | None | N |
E/Q | 0.1779 | likely_benign | 0.1506 | benign | -0.674 | Destabilizing | 0.638 | D | 0.637 | neutral | N | 0.521418398 | None | None | N |
E/R | 0.3415 | ambiguous | 0.2814 | benign | -0.3 | Destabilizing | 0.7 | D | 0.662 | neutral | None | None | None | None | N |
E/S | 0.2119 | likely_benign | 0.1833 | benign | -1.052 | Destabilizing | 0.25 | N | 0.599 | neutral | None | None | None | None | N |
E/T | 0.2145 | likely_benign | 0.1896 | benign | -0.781 | Destabilizing | 0.399 | N | 0.673 | neutral | None | None | None | None | N |
E/V | 0.1672 | likely_benign | 0.1509 | benign | -0.219 | Destabilizing | 0.015 | N | 0.423 | neutral | N | 0.495541306 | None | None | N |
E/W | 0.828 | likely_pathogenic | 0.7949 | pathogenic | -0.427 | Destabilizing | 0.982 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Y | 0.4918 | ambiguous | 0.4483 | ambiguous | -0.356 | Destabilizing | 0.935 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.