Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6269 | 19030;19031;19032 | chr2:178729351;178729350;178729349 | chr2:179594078;179594077;179594076 |
N2AB | 5952 | 18079;18080;18081 | chr2:178729351;178729350;178729349 | chr2:179594078;179594077;179594076 |
N2A | 5025 | 15298;15299;15300 | chr2:178729351;178729350;178729349 | chr2:179594078;179594077;179594076 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.879 | 0.873 | 0.894440237169 | gnomAD-4.0.0 | 1.36863E-06 | None | None | None | None | N | None | 0 | 2.23734E-05 | None | 0 | 0 | None | 0 | 0 | 8.99575E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9947 | likely_pathogenic | 0.9963 | pathogenic | -2.792 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/C | 0.9473 | likely_pathogenic | 0.967 | pathogenic | -2.206 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.652959066 | None | None | N |
Y/D | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -3.51 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.652959066 | None | None | N |
Y/E | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -3.265 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/F | 0.1888 | likely_benign | 0.2267 | benign | -1.118 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | D | 0.565766957 | None | None | N |
Y/G | 0.9908 | likely_pathogenic | 0.992 | pathogenic | -3.253 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/H | 0.9771 | likely_pathogenic | 0.9846 | pathogenic | -2.429 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | D | 0.652757262 | None | None | N |
Y/I | 0.8514 | likely_pathogenic | 0.8999 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/K | 0.9983 | likely_pathogenic | 0.9989 | pathogenic | -2.432 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/L | 0.8622 | likely_pathogenic | 0.893 | pathogenic | -1.254 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
Y/M | 0.9527 | likely_pathogenic | 0.9675 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/N | 0.981 | likely_pathogenic | 0.9852 | pathogenic | -3.397 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.652959066 | None | None | N |
Y/P | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/Q | 0.998 | likely_pathogenic | 0.9987 | pathogenic | -2.969 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/R | 0.9956 | likely_pathogenic | 0.997 | pathogenic | -2.541 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/S | 0.9912 | likely_pathogenic | 0.9933 | pathogenic | -3.709 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.652959066 | None | None | N |
Y/T | 0.994 | likely_pathogenic | 0.9958 | pathogenic | -3.315 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.8591 | likely_pathogenic | 0.8972 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Y/W | 0.8555 | likely_pathogenic | 0.8801 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.