Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6273 | 19042;19043;19044 | chr2:178729339;178729338;178729337 | chr2:179594066;179594065;179594064 |
N2AB | 5956 | 18091;18092;18093 | chr2:178729339;178729338;178729337 | chr2:179594066;179594065;179594064 |
N2A | 5029 | 15310;15311;15312 | chr2:178729339;178729338;178729337 | chr2:179594066;179594065;179594064 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.004 | N | 0.481 | 0.201 | 0.180583059064 | gnomAD-4.0.0 | 4.79096E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29809E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3585 | ambiguous | 0.3849 | ambiguous | -1.824 | Destabilizing | 0.001 | N | 0.295 | neutral | N | 0.437138002 | None | None | N |
V/C | 0.8537 | likely_pathogenic | 0.8887 | pathogenic | -1.473 | Destabilizing | 0.935 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.98 | likely_pathogenic | 0.9845 | pathogenic | -2.333 | Highly Destabilizing | 0.555 | D | 0.845 | deleterious | None | None | None | None | N |
V/E | 0.9663 | likely_pathogenic | 0.972 | pathogenic | -2.029 | Highly Destabilizing | 0.484 | N | 0.799 | deleterious | D | 0.53837075 | None | None | N |
V/F | 0.4112 | ambiguous | 0.5053 | ambiguous | -0.974 | Destabilizing | 0.38 | N | 0.815 | deleterious | None | None | None | None | N |
V/G | 0.7014 | likely_pathogenic | 0.7456 | pathogenic | -2.44 | Highly Destabilizing | 0.117 | N | 0.789 | deleterious | N | 0.498617068 | None | None | N |
V/H | 0.9778 | likely_pathogenic | 0.9847 | pathogenic | -2.402 | Highly Destabilizing | 0.935 | D | 0.838 | deleterious | None | None | None | None | N |
V/I | 0.0679 | likely_benign | 0.0733 | benign | -0.058 | Destabilizing | None | N | 0.228 | neutral | N | 0.488946195 | None | None | N |
V/K | 0.9783 | likely_pathogenic | 0.9826 | pathogenic | -1.164 | Destabilizing | 0.555 | D | 0.801 | deleterious | None | None | None | None | N |
V/L | 0.2493 | likely_benign | 0.306 | benign | -0.058 | Destabilizing | 0.004 | N | 0.481 | neutral | N | 0.495703779 | None | None | N |
V/M | 0.344 | ambiguous | 0.4081 | ambiguous | -0.444 | Destabilizing | 0.38 | N | 0.691 | prob.neutral | None | None | None | None | N |
V/N | 0.9368 | likely_pathogenic | 0.9527 | pathogenic | -1.718 | Destabilizing | 0.791 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.956 | likely_pathogenic | 0.9739 | pathogenic | -0.623 | Destabilizing | 0.555 | D | 0.833 | deleterious | None | None | None | None | N |
V/Q | 0.9545 | likely_pathogenic | 0.965 | pathogenic | -1.369 | Destabilizing | 0.791 | D | 0.833 | deleterious | None | None | None | None | N |
V/R | 0.946 | likely_pathogenic | 0.957 | pathogenic | -1.426 | Destabilizing | 0.555 | D | 0.856 | deleterious | None | None | None | None | N |
V/S | 0.7006 | likely_pathogenic | 0.748 | pathogenic | -2.354 | Highly Destabilizing | 0.081 | N | 0.773 | deleterious | None | None | None | None | N |
V/T | 0.6014 | likely_pathogenic | 0.6647 | pathogenic | -1.875 | Destabilizing | 0.149 | N | 0.676 | prob.neutral | None | None | None | None | N |
V/W | 0.9781 | likely_pathogenic | 0.9858 | pathogenic | -1.483 | Destabilizing | 0.935 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.91 | likely_pathogenic | 0.9401 | pathogenic | -1.085 | Destabilizing | 0.555 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.