Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6274 | 19045;19046;19047 | chr2:178729336;178729335;178729334 | chr2:179594063;179594062;179594061 |
N2AB | 5957 | 18094;18095;18096 | chr2:178729336;178729335;178729334 | chr2:179594063;179594062;179594061 |
N2A | 5030 | 15313;15314;15315 | chr2:178729336;178729335;178729334 | chr2:179594063;179594062;179594061 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.497 | N | 0.523 | 0.353 | 0.126345400529 | gnomAD-4.0.0 | 2.05339E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79958E-06 | 1.15969E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0707 | likely_benign | 0.0784 | benign | -0.85 | Destabilizing | None | N | 0.169 | neutral | N | 0.479494418 | None | None | N |
S/C | 0.1522 | likely_benign | 0.156 | benign | -0.746 | Destabilizing | 0.883 | D | 0.584 | neutral | N | 0.504699319 | None | None | N |
S/D | 0.5038 | ambiguous | 0.5256 | ambiguous | -0.799 | Destabilizing | 0.272 | N | 0.517 | neutral | None | None | None | None | N |
S/E | 0.4828 | ambiguous | 0.5137 | ambiguous | -0.794 | Destabilizing | 0.272 | N | 0.466 | neutral | None | None | None | None | N |
S/F | 0.1988 | likely_benign | 0.1917 | benign | -1.121 | Destabilizing | 0.667 | D | 0.688 | prob.neutral | N | 0.512569629 | None | None | N |
S/G | 0.1203 | likely_benign | 0.1273 | benign | -1.089 | Destabilizing | 0.072 | N | 0.431 | neutral | None | None | None | None | N |
S/H | 0.3217 | likely_benign | 0.3336 | benign | -1.579 | Destabilizing | 0.968 | D | 0.582 | neutral | None | None | None | None | N |
S/I | 0.2241 | likely_benign | 0.2187 | benign | -0.316 | Destabilizing | 0.567 | D | 0.619 | neutral | None | None | None | None | N |
S/K | 0.522 | ambiguous | 0.5438 | ambiguous | -0.804 | Destabilizing | 0.272 | N | 0.469 | neutral | None | None | None | None | N |
S/L | 0.1088 | likely_benign | 0.1073 | benign | -0.316 | Destabilizing | 0.157 | N | 0.622 | neutral | None | None | None | None | N |
S/M | 0.2057 | likely_benign | 0.2196 | benign | 0.046 | Stabilizing | 0.909 | D | 0.589 | neutral | None | None | None | None | N |
S/N | 0.1918 | likely_benign | 0.195 | benign | -0.88 | Destabilizing | 0.431 | N | 0.523 | neutral | None | None | None | None | N |
S/P | 0.8907 | likely_pathogenic | 0.9096 | pathogenic | -0.461 | Destabilizing | 0.497 | N | 0.523 | neutral | N | 0.515802135 | None | None | N |
S/Q | 0.398 | ambiguous | 0.4297 | ambiguous | -1.095 | Destabilizing | 0.726 | D | 0.538 | neutral | None | None | None | None | N |
S/R | 0.4124 | ambiguous | 0.4208 | ambiguous | -0.638 | Destabilizing | 0.567 | D | 0.527 | neutral | None | None | None | None | N |
S/T | 0.0812 | likely_benign | 0.0858 | benign | -0.856 | Destabilizing | 0.055 | N | 0.448 | neutral | N | 0.462522024 | None | None | N |
S/V | 0.1934 | likely_benign | 0.2095 | benign | -0.461 | Destabilizing | 0.157 | N | 0.623 | neutral | None | None | None | None | N |
S/W | 0.3225 | likely_benign | 0.3144 | benign | -1.084 | Destabilizing | 0.968 | D | 0.75 | deleterious | None | None | None | None | N |
S/Y | 0.1907 | likely_benign | 0.1892 | benign | -0.804 | Destabilizing | 0.667 | D | 0.695 | prob.neutral | N | 0.49769788 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.