Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6279 | 19060;19061;19062 | chr2:178729321;178729320;178729319 | chr2:179594048;179594047;179594046 |
N2AB | 5962 | 18109;18110;18111 | chr2:178729321;178729320;178729319 | chr2:179594048;179594047;179594046 |
N2A | 5035 | 15328;15329;15330 | chr2:178729321;178729320;178729319 | chr2:179594048;179594047;179594046 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs776251068 | -0.002 | 0.984 | N | 0.625 | 0.265 | 0.463328977263 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 8.95E-06 | 0 |
S/R | rs776251068 | -0.002 | 0.984 | N | 0.625 | 0.265 | 0.463328977263 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/R | rs776251068 | -0.002 | 0.984 | N | 0.625 | 0.265 | 0.463328977263 | gnomAD-4.0.0 | 3.85259E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.80146E-06 | 1.34279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1145 | likely_benign | 0.1101 | benign | -0.402 | Destabilizing | 0.702 | D | 0.475 | neutral | None | None | None | None | I |
S/C | 0.1906 | likely_benign | 0.1775 | benign | -0.217 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.516068851 | None | None | I |
S/D | 0.4413 | ambiguous | 0.392 | ambiguous | -0.024 | Destabilizing | 0.959 | D | 0.549 | neutral | None | None | None | None | I |
S/E | 0.4606 | ambiguous | 0.4154 | ambiguous | -0.134 | Destabilizing | 0.959 | D | 0.549 | neutral | None | None | None | None | I |
S/F | 0.2053 | likely_benign | 0.1733 | benign | -1.088 | Destabilizing | 0.952 | D | 0.701 | prob.neutral | None | None | None | None | I |
S/G | 0.113 | likely_benign | 0.1158 | benign | -0.477 | Destabilizing | 0.026 | N | 0.178 | neutral | N | 0.489708936 | None | None | I |
S/H | 0.2787 | likely_benign | 0.2701 | benign | -1.01 | Destabilizing | 0.988 | D | 0.645 | neutral | None | None | None | None | I |
S/I | 0.1478 | likely_benign | 0.1296 | benign | -0.335 | Destabilizing | 0.984 | D | 0.709 | prob.delet. | N | 0.486354801 | None | None | I |
S/K | 0.4619 | ambiguous | 0.4418 | ambiguous | -0.43 | Destabilizing | 0.959 | D | 0.549 | neutral | None | None | None | None | I |
S/L | 0.1388 | likely_benign | 0.1195 | benign | -0.335 | Destabilizing | 0.919 | D | 0.637 | neutral | None | None | None | None | I |
S/M | 0.2165 | likely_benign | 0.2099 | benign | 0.05 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
S/N | 0.1424 | likely_benign | 0.1289 | benign | -0.121 | Destabilizing | 0.896 | D | 0.57 | neutral | N | 0.520669037 | None | None | I |
S/P | 0.6809 | likely_pathogenic | 0.6408 | pathogenic | -0.332 | Destabilizing | 0.996 | D | 0.628 | neutral | None | None | None | None | I |
S/Q | 0.3558 | ambiguous | 0.3467 | ambiguous | -0.44 | Destabilizing | 0.996 | D | 0.58 | neutral | None | None | None | None | I |
S/R | 0.3415 | ambiguous | 0.3171 | benign | -0.186 | Destabilizing | 0.984 | D | 0.625 | neutral | N | 0.513857708 | None | None | I |
S/T | 0.0872 | likely_benign | 0.0865 | benign | -0.249 | Destabilizing | 0.946 | D | 0.531 | neutral | N | 0.513145632 | None | None | I |
S/V | 0.1748 | likely_benign | 0.1642 | benign | -0.332 | Destabilizing | 0.976 | D | 0.621 | neutral | None | None | None | None | I |
S/W | 0.3719 | ambiguous | 0.3302 | benign | -1.083 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
S/Y | 0.1961 | likely_benign | 0.1657 | benign | -0.805 | Destabilizing | 0.261 | N | 0.463 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.