Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6282 | 19069;19070;19071 | chr2:178729312;178729311;178729310 | chr2:179594039;179594038;179594037 |
N2AB | 5965 | 18118;18119;18120 | chr2:178729312;178729311;178729310 | chr2:179594039;179594038;179594037 |
N2A | 5038 | 15337;15338;15339 | chr2:178729312;178729311;178729310 | chr2:179594039;179594038;179594037 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs2079961331 | None | 0.484 | N | 0.82 | 0.339 | 0.764433835033 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
C/F | rs2079961331 | None | 0.484 | N | 0.82 | 0.339 | 0.764433835033 | gnomAD-4.0.0 | 2.0299E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40987E-06 | 0 | 0 |
C/R | None | None | 0.317 | D | 0.835 | 0.301 | 0.649823028507 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2748 | likely_benign | 0.2905 | benign | -1.939 | Destabilizing | 0.035 | N | 0.509 | neutral | None | None | None | None | N |
C/D | 0.7822 | likely_pathogenic | 0.7419 | pathogenic | -0.404 | Destabilizing | 0.235 | N | 0.811 | deleterious | None | None | None | None | N |
C/E | 0.9042 | likely_pathogenic | 0.8732 | pathogenic | -0.297 | Destabilizing | 0.235 | N | 0.811 | deleterious | None | None | None | None | N |
C/F | 0.4053 | ambiguous | 0.322 | benign | -1.274 | Destabilizing | 0.484 | N | 0.82 | deleterious | N | 0.501265824 | None | None | N |
C/G | 0.1583 | likely_benign | 0.1701 | benign | -2.252 | Highly Destabilizing | 0.062 | N | 0.789 | deleterious | N | 0.487934509 | None | None | N |
C/H | 0.6818 | likely_pathogenic | 0.5977 | pathogenic | -2.158 | Highly Destabilizing | 0.824 | D | 0.817 | deleterious | None | None | None | None | N |
C/I | 0.5743 | likely_pathogenic | 0.5157 | ambiguous | -1.125 | Destabilizing | 0.38 | N | 0.818 | deleterious | None | None | None | None | N |
C/K | 0.8977 | likely_pathogenic | 0.8429 | pathogenic | -1.026 | Destabilizing | 0.081 | N | 0.813 | deleterious | None | None | None | None | N |
C/L | 0.5636 | ambiguous | 0.4976 | ambiguous | -1.125 | Destabilizing | 0.149 | N | 0.772 | deleterious | None | None | None | None | N |
C/M | 0.6885 | likely_pathogenic | 0.6784 | pathogenic | -0.142 | Destabilizing | 0.935 | D | 0.791 | deleterious | None | None | None | None | N |
C/N | 0.5155 | ambiguous | 0.5295 | ambiguous | -1.002 | Destabilizing | 0.235 | N | 0.811 | deleterious | None | None | None | None | N |
C/P | 0.9814 | likely_pathogenic | 0.9765 | pathogenic | -1.371 | Destabilizing | 0.38 | N | 0.829 | deleterious | None | None | None | None | N |
C/Q | 0.7793 | likely_pathogenic | 0.7077 | pathogenic | -0.918 | Destabilizing | 0.38 | N | 0.836 | deleterious | None | None | None | None | N |
C/R | 0.686 | likely_pathogenic | 0.5382 | ambiguous | -0.869 | Destabilizing | 0.317 | N | 0.835 | deleterious | D | 0.532846113 | None | None | N |
C/S | 0.1277 | likely_benign | 0.1498 | benign | -1.598 | Destabilizing | None | N | 0.431 | neutral | N | 0.442666826 | None | None | N |
C/T | 0.2515 | likely_benign | 0.2874 | benign | -1.304 | Destabilizing | 0.081 | N | 0.77 | deleterious | None | None | None | None | N |
C/V | 0.4263 | ambiguous | 0.3964 | ambiguous | -1.371 | Destabilizing | 0.149 | N | 0.785 | deleterious | None | None | None | None | N |
C/W | 0.7811 | likely_pathogenic | 0.6897 | pathogenic | -1.22 | Destabilizing | 0.915 | D | 0.778 | deleterious | N | 0.506799232 | None | None | N |
C/Y | 0.5732 | likely_pathogenic | 0.4662 | ambiguous | -1.234 | Destabilizing | 0.484 | N | 0.801 | deleterious | N | 0.497898462 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.