Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6284 | 19075;19076;19077 | chr2:178729306;178729305;178729304 | chr2:179594033;179594032;179594031 |
N2AB | 5967 | 18124;18125;18126 | chr2:178729306;178729305;178729304 | chr2:179594033;179594032;179594031 |
N2A | 5040 | 15343;15344;15345 | chr2:178729306;178729305;178729304 | chr2:179594033;179594032;179594031 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.17 | 0.194 | 0.0138822411134 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | None | None | 0.317 | N | 0.789 | 0.257 | 0.303781844768 | gnomAD-4.0.0 | 1.59887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77731E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0595 | likely_benign | 0.0596 | benign | -1.113 | Destabilizing | None | N | 0.17 | neutral | N | 0.343827984 | None | None | N |
T/C | 0.3368 | likely_benign | 0.3516 | ambiguous | -0.777 | Destabilizing | 0.824 | D | 0.756 | deleterious | None | None | None | None | N |
T/D | 0.6427 | likely_pathogenic | 0.7034 | pathogenic | -0.885 | Destabilizing | 0.149 | N | 0.769 | deleterious | None | None | None | None | N |
T/E | 0.5876 | likely_pathogenic | 0.6303 | pathogenic | -0.764 | Destabilizing | 0.149 | N | 0.734 | prob.delet. | None | None | None | None | N |
T/F | 0.4747 | ambiguous | 0.5226 | ambiguous | -0.887 | Destabilizing | 0.555 | D | 0.783 | deleterious | None | None | None | None | N |
T/G | 0.1839 | likely_benign | 0.2099 | benign | -1.489 | Destabilizing | 0.035 | N | 0.637 | neutral | None | None | None | None | N |
T/H | 0.5253 | ambiguous | 0.5709 | pathogenic | -1.698 | Destabilizing | 0.935 | D | 0.745 | deleterious | None | None | None | None | N |
T/I | 0.3199 | likely_benign | 0.3249 | benign | -0.158 | Destabilizing | 0.317 | N | 0.789 | deleterious | N | 0.466370405 | None | None | N |
T/K | 0.5408 | ambiguous | 0.6017 | pathogenic | -0.741 | Destabilizing | 0.149 | N | 0.744 | deleterious | None | None | None | None | N |
T/L | 0.1891 | likely_benign | 0.2055 | benign | -0.158 | Destabilizing | 0.081 | N | 0.68 | prob.neutral | None | None | None | None | N |
T/M | 0.1396 | likely_benign | 0.1393 | benign | 0.001 | Stabilizing | 0.555 | D | 0.76 | deleterious | None | None | None | None | N |
T/N | 0.2701 | likely_benign | 0.2967 | benign | -1.106 | Destabilizing | 0.117 | N | 0.7 | prob.neutral | N | 0.515396503 | None | None | N |
T/P | 0.6076 | likely_pathogenic | 0.685 | pathogenic | -0.443 | Destabilizing | 0.317 | N | 0.797 | deleterious | D | 0.526613574 | None | None | N |
T/Q | 0.4506 | ambiguous | 0.4883 | ambiguous | -1.046 | Destabilizing | 0.555 | D | 0.788 | deleterious | None | None | None | None | N |
T/R | 0.4283 | ambiguous | 0.4752 | ambiguous | -0.773 | Destabilizing | 0.38 | N | 0.797 | deleterious | None | None | None | None | N |
T/S | 0.1046 | likely_benign | 0.1105 | benign | -1.39 | Destabilizing | 0.005 | N | 0.214 | neutral | N | 0.415309654 | None | None | N |
T/V | 0.1826 | likely_benign | 0.1871 | benign | -0.443 | Destabilizing | 0.081 | N | 0.59 | neutral | None | None | None | None | N |
T/W | 0.8373 | likely_pathogenic | 0.8607 | pathogenic | -0.901 | Destabilizing | 0.935 | D | 0.751 | deleterious | None | None | None | None | N |
T/Y | 0.5586 | ambiguous | 0.6087 | pathogenic | -0.603 | Destabilizing | 0.555 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.