Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6287 | 19084;19085;19086 | chr2:178729297;178729296;178729295 | chr2:179594024;179594023;179594022 |
N2AB | 5970 | 18133;18134;18135 | chr2:178729297;178729296;178729295 | chr2:179594024;179594023;179594022 |
N2A | 5043 | 15352;15353;15354 | chr2:178729297;178729296;178729295 | chr2:179594024;179594023;179594022 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.107 | 0.082 | 0.0551355673512 | gnomAD-4.0.0 | 1.64281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95342E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2876 | likely_benign | 0.2903 | benign | -0.976 | Destabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
A/D | 0.155 | likely_benign | 0.154 | benign | -1.181 | Destabilizing | 0.012 | N | 0.313 | neutral | N | 0.431272744 | None | None | N |
A/E | 0.1633 | likely_benign | 0.1598 | benign | -1.236 | Destabilizing | 0.016 | N | 0.327 | neutral | None | None | None | None | N |
A/F | 0.1233 | likely_benign | 0.1264 | benign | -1.032 | Destabilizing | 0.356 | N | 0.357 | neutral | None | None | None | None | N |
A/G | 0.1054 | likely_benign | 0.1032 | benign | -1.138 | Destabilizing | 0.012 | N | 0.282 | neutral | N | 0.491225125 | None | None | N |
A/H | 0.226 | likely_benign | 0.2346 | benign | -1.246 | Destabilizing | 0.001 | N | 0.26 | neutral | None | None | None | None | N |
A/I | 0.1047 | likely_benign | 0.1076 | benign | -0.435 | Destabilizing | 0.072 | N | 0.342 | neutral | None | None | None | None | N |
A/K | 0.2805 | likely_benign | 0.2846 | benign | -1.239 | Destabilizing | 0.001 | N | 0.175 | neutral | None | None | None | None | N |
A/L | 0.087 | likely_benign | 0.0918 | benign | -0.435 | Destabilizing | 0.031 | N | 0.329 | neutral | None | None | None | None | N |
A/M | 0.1261 | likely_benign | 0.1298 | benign | -0.384 | Destabilizing | 0.628 | D | 0.349 | neutral | None | None | None | None | N |
A/N | 0.1056 | likely_benign | 0.1096 | benign | -0.924 | Destabilizing | 0.001 | N | 0.237 | neutral | None | None | None | None | N |
A/P | 0.4524 | ambiguous | 0.4333 | ambiguous | -0.551 | Destabilizing | 0.055 | N | 0.346 | neutral | N | 0.509810885 | None | None | N |
A/Q | 0.2043 | likely_benign | 0.2035 | benign | -1.127 | Destabilizing | 0.072 | N | 0.347 | neutral | None | None | None | None | N |
A/R | 0.2351 | likely_benign | 0.2349 | benign | -0.837 | Destabilizing | 0.038 | N | 0.317 | neutral | None | None | None | None | N |
A/S | 0.0652 | likely_benign | 0.0656 | benign | -1.258 | Destabilizing | None | N | 0.079 | neutral | N | 0.408299884 | None | None | N |
A/T | 0.0643 | likely_benign | 0.0651 | benign | -1.224 | Destabilizing | None | N | 0.107 | neutral | N | 0.353521249 | None | None | N |
A/V | 0.0796 | likely_benign | 0.0791 | benign | -0.551 | Destabilizing | 0.055 | N | 0.301 | neutral | N | 0.426538928 | None | None | N |
A/W | 0.4105 | ambiguous | 0.4035 | ambiguous | -1.313 | Destabilizing | 0.864 | D | 0.41 | neutral | None | None | None | None | N |
A/Y | 0.1873 | likely_benign | 0.1986 | benign | -0.943 | Destabilizing | 0.214 | N | 0.35 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.