Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6292 | 19099;19100;19101 | chr2:178729164;178729163;178729162 | chr2:179593891;179593890;179593889 |
N2AB | 5975 | 18148;18149;18150 | chr2:178729164;178729163;178729162 | chr2:179593891;179593890;179593889 |
N2A | 5048 | 15367;15368;15369 | chr2:178729164;178729163;178729162 | chr2:179593891;179593890;179593889 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1180688317 | -1.925 | 0.987 | D | 0.834 | 0.765 | 0.633965432156 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
P/S | rs1180688317 | -1.925 | 0.987 | D | 0.834 | 0.765 | 0.633965432156 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1180688317 | -1.925 | 0.987 | D | 0.834 | 0.765 | 0.633965432156 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47059E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4285 | ambiguous | 0.4113 | ambiguous | -1.614 | Destabilizing | 0.117 | N | 0.693 | prob.neutral | D | 0.615619841 | None | None | N |
P/C | 0.9606 | likely_pathogenic | 0.9609 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/D | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -1.4 | Destabilizing | 0.998 | D | 0.888 | deleterious | None | None | None | None | N |
P/E | 0.9955 | likely_pathogenic | 0.9947 | pathogenic | -1.382 | Destabilizing | 0.995 | D | 0.889 | deleterious | None | None | None | None | N |
P/F | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
P/G | 0.978 | likely_pathogenic | 0.9778 | pathogenic | -1.938 | Destabilizing | 0.966 | D | 0.835 | deleterious | None | None | None | None | N |
P/H | 0.9935 | likely_pathogenic | 0.9937 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/I | 0.9114 | likely_pathogenic | 0.8888 | pathogenic | -0.814 | Destabilizing | 0.995 | D | 0.882 | deleterious | None | None | None | None | N |
P/K | 0.997 | likely_pathogenic | 0.997 | pathogenic | -1.181 | Destabilizing | 0.995 | D | 0.888 | deleterious | None | None | None | None | N |
P/L | 0.8332 | likely_pathogenic | 0.8138 | pathogenic | -0.814 | Destabilizing | 0.993 | D | 0.866 | deleterious | D | 0.657580923 | None | None | N |
P/M | 0.9786 | likely_pathogenic | 0.9757 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/N | 0.997 | likely_pathogenic | 0.9969 | pathogenic | -1.057 | Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
P/Q | 0.9881 | likely_pathogenic | 0.9878 | pathogenic | -1.233 | Destabilizing | 0.997 | D | 0.883 | deleterious | D | 0.657782727 | None | None | N |
P/R | 0.9868 | likely_pathogenic | 0.9867 | pathogenic | -0.733 | Destabilizing | 0.997 | D | 0.883 | deleterious | D | 0.657782727 | None | None | N |
P/S | 0.9298 | likely_pathogenic | 0.9255 | pathogenic | -1.655 | Destabilizing | 0.987 | D | 0.834 | deleterious | D | 0.641359757 | None | None | N |
P/T | 0.8921 | likely_pathogenic | 0.8762 | pathogenic | -1.523 | Destabilizing | 0.993 | D | 0.878 | deleterious | D | 0.657580923 | None | None | N |
P/V | 0.7593 | likely_pathogenic | 0.7117 | pathogenic | -1.047 | Destabilizing | 0.99 | D | 0.858 | deleterious | None | None | None | None | N |
P/W | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
P/Y | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.