Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6293 | 19102;19103;19104 | chr2:178729161;178729160;178729159 | chr2:179593888;179593887;179593886 |
N2AB | 5976 | 18151;18152;18153 | chr2:178729161;178729160;178729159 | chr2:179593888;179593887;179593886 |
N2A | 5049 | 15370;15371;15372 | chr2:178729161;178729160;178729159 | chr2:179593888;179593887;179593886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1560769509 | None | 0.921 | N | 0.379 | 0.387 | 0.305086939656 | gnomAD-4.0.0 | 2.10097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.82503E-06 | 0 | 1.69733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0812 | likely_benign | 0.0738 | benign | -0.425 | Destabilizing | 0.089 | N | 0.177 | neutral | N | 0.505814228 | None | None | N |
S/C | 0.1251 | likely_benign | 0.1294 | benign | -0.355 | Destabilizing | 0.983 | D | 0.325 | neutral | None | None | None | None | N |
S/D | 0.5412 | ambiguous | 0.5445 | ambiguous | 0.422 | Stabilizing | 0.593 | D | 0.31 | neutral | None | None | None | None | N |
S/E | 0.5356 | ambiguous | 0.5674 | pathogenic | 0.404 | Stabilizing | 0.593 | D | 0.232 | neutral | None | None | None | None | N |
S/F | 0.1517 | likely_benign | 0.1495 | benign | -0.788 | Destabilizing | 0.264 | N | 0.365 | neutral | None | None | None | None | N |
S/G | 0.1207 | likely_benign | 0.1121 | benign | -0.626 | Destabilizing | 0.593 | D | 0.229 | neutral | None | None | None | None | N |
S/H | 0.2873 | likely_benign | 0.3146 | benign | -0.96 | Destabilizing | 0.836 | D | 0.331 | neutral | None | None | None | None | N |
S/I | 0.1336 | likely_benign | 0.1328 | benign | -0.011 | Destabilizing | 0.129 | N | 0.321 | neutral | None | None | None | None | N |
S/K | 0.5385 | ambiguous | 0.5849 | pathogenic | -0.314 | Destabilizing | 0.593 | D | 0.236 | neutral | None | None | None | None | N |
S/L | 0.0873 | likely_benign | 0.0849 | benign | -0.011 | Destabilizing | 0.001 | N | 0.26 | neutral | N | 0.483846359 | None | None | N |
S/M | 0.1939 | likely_benign | 0.1916 | benign | -0.074 | Destabilizing | 0.716 | D | 0.343 | neutral | None | None | None | None | N |
S/N | 0.1786 | likely_benign | 0.1757 | benign | -0.273 | Destabilizing | 0.593 | D | 0.335 | neutral | None | None | None | None | N |
S/P | 0.8956 | likely_pathogenic | 0.8649 | pathogenic | -0.116 | Destabilizing | 0.921 | D | 0.379 | neutral | N | 0.485910274 | None | None | N |
S/Q | 0.4092 | ambiguous | 0.445 | ambiguous | -0.349 | Destabilizing | 0.94 | D | 0.373 | neutral | None | None | None | None | N |
S/R | 0.4019 | ambiguous | 0.4482 | ambiguous | -0.226 | Destabilizing | 0.836 | D | 0.391 | neutral | None | None | None | None | N |
S/T | 0.0714 | likely_benign | 0.067 | benign | -0.318 | Destabilizing | 0.003 | N | 0.101 | neutral | N | 0.44645928 | None | None | N |
S/V | 0.1317 | likely_benign | 0.1286 | benign | -0.116 | Destabilizing | 0.01 | N | 0.301 | neutral | None | None | None | None | N |
S/W | 0.3641 | ambiguous | 0.3825 | ambiguous | -0.83 | Destabilizing | 0.983 | D | 0.402 | neutral | None | None | None | None | N |
S/Y | 0.1696 | likely_benign | 0.169 | benign | -0.505 | Destabilizing | 0.01 | N | 0.279 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.