Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6295 | 19108;19109;19110 | chr2:178729155;178729154;178729153 | chr2:179593882;179593881;179593880 |
N2AB | 5978 | 18157;18158;18159 | chr2:178729155;178729154;178729153 | chr2:179593882;179593881;179593880 |
N2A | 5051 | 15376;15377;15378 | chr2:178729155;178729154;178729153 | chr2:179593882;179593881;179593880 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.056 | 0.117 | 0.0920862733494 | gnomAD-4.0.0 | 3.34191E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.95948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2186 | likely_benign | 0.1926 | benign | -0.664 | Destabilizing | 0.007 | N | 0.141 | neutral | None | None | None | None | I |
I/C | 0.5195 | ambiguous | 0.5274 | ambiguous | -0.735 | Destabilizing | 0.356 | N | 0.274 | neutral | None | None | None | None | I |
I/D | 0.5036 | ambiguous | 0.5029 | ambiguous | 0.133 | Stabilizing | 0.038 | N | 0.369 | neutral | None | None | None | None | I |
I/E | 0.3106 | likely_benign | 0.3166 | benign | 0.065 | Stabilizing | 0.072 | N | 0.325 | neutral | None | None | None | None | I |
I/F | 0.1425 | likely_benign | 0.1265 | benign | -0.512 | Destabilizing | 0.055 | N | 0.234 | neutral | N | 0.452551789 | None | None | I |
I/G | 0.4304 | ambiguous | 0.3898 | ambiguous | -0.848 | Destabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | I |
I/H | 0.2643 | likely_benign | 0.2631 | benign | -0.033 | Destabilizing | 0.214 | N | 0.298 | neutral | None | None | None | None | I |
I/K | 0.1669 | likely_benign | 0.1713 | benign | -0.341 | Destabilizing | 0.038 | N | 0.321 | neutral | None | None | None | None | I |
I/L | 0.0812 | likely_benign | 0.0785 | benign | -0.294 | Destabilizing | None | N | 0.062 | neutral | N | 0.402181988 | None | None | I |
I/M | 0.1003 | likely_benign | 0.0924 | benign | -0.408 | Destabilizing | 0.171 | N | 0.242 | neutral | N | 0.485357945 | None | None | I |
I/N | 0.1667 | likely_benign | 0.1678 | benign | -0.235 | Destabilizing | None | N | 0.197 | neutral | N | 0.510312318 | None | None | I |
I/P | 0.6359 | likely_pathogenic | 0.6214 | pathogenic | -0.384 | Destabilizing | 0.136 | N | 0.393 | neutral | None | None | None | None | I |
I/Q | 0.1855 | likely_benign | 0.1892 | benign | -0.404 | Destabilizing | 0.214 | N | 0.403 | neutral | None | None | None | None | I |
I/R | 0.1178 | likely_benign | 0.1268 | benign | 0.172 | Stabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | I |
I/S | 0.1535 | likely_benign | 0.1533 | benign | -0.769 | Destabilizing | 0.012 | N | 0.181 | neutral | N | 0.452957525 | None | None | I |
I/T | 0.104 | likely_benign | 0.0982 | benign | -0.723 | Destabilizing | None | N | 0.089 | neutral | N | 0.403222138 | None | None | I |
I/V | 0.073 | likely_benign | 0.0689 | benign | -0.384 | Destabilizing | None | N | 0.056 | neutral | N | 0.359449931 | None | None | I |
I/W | 0.5919 | likely_pathogenic | 0.5937 | pathogenic | -0.523 | Destabilizing | 0.864 | D | 0.293 | neutral | None | None | None | None | I |
I/Y | 0.3362 | likely_benign | 0.3518 | ambiguous | -0.283 | Destabilizing | 0.356 | N | 0.365 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.