Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6297 | 19114;19115;19116 | chr2:178729149;178729148;178729147 | chr2:179593876;179593875;179593874 |
N2AB | 5980 | 18163;18164;18165 | chr2:178729149;178729148;178729147 | chr2:179593876;179593875;179593874 |
N2A | 5053 | 15382;15383;15384 | chr2:178729149;178729148;178729147 | chr2:179593876;179593875;179593874 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.124 | N | 0.555 | 0.281 | 0.369867359543 | gnomAD-4.0.0 | 1.6573E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95933E-06 | 0 | 0 |
K/R | rs1208730507 | None | 0.001 | D | 0.187 | 0.126 | 0.269111216191 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1208730507 | None | 0.001 | D | 0.187 | 0.126 | 0.269111216191 | gnomAD-4.0.0 | 2.02988E-06 | None | None | None | None | I | None | 1.74672E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20493E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6488 | likely_pathogenic | 0.5916 | pathogenic | -0.612 | Destabilizing | 0.272 | N | 0.597 | neutral | None | None | None | None | I |
K/C | 0.9004 | likely_pathogenic | 0.8882 | pathogenic | -0.621 | Destabilizing | 0.968 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/D | 0.8034 | likely_pathogenic | 0.7651 | pathogenic | 0.343 | Stabilizing | 0.567 | D | 0.612 | neutral | None | None | None | None | I |
K/E | 0.4041 | ambiguous | 0.3609 | ambiguous | 0.459 | Stabilizing | 0.124 | N | 0.555 | neutral | N | 0.484251206 | None | None | I |
K/F | 0.9264 | likely_pathogenic | 0.9049 | pathogenic | -0.294 | Destabilizing | 0.726 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/G | 0.6956 | likely_pathogenic | 0.6523 | pathogenic | -0.964 | Destabilizing | 0.272 | N | 0.58 | neutral | None | None | None | None | I |
K/H | 0.5155 | ambiguous | 0.4729 | ambiguous | -1.152 | Destabilizing | 0.909 | D | 0.664 | neutral | None | None | None | None | I |
K/I | 0.7032 | likely_pathogenic | 0.6614 | pathogenic | 0.294 | Stabilizing | 0.567 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/L | 0.6645 | likely_pathogenic | 0.6144 | pathogenic | 0.294 | Stabilizing | 0.272 | N | 0.583 | neutral | None | None | None | None | I |
K/M | 0.4187 | ambiguous | 0.3997 | ambiguous | 0.078 | Stabilizing | 0.958 | D | 0.661 | neutral | D | 0.534920348 | None | None | I |
K/N | 0.6131 | likely_pathogenic | 0.5747 | pathogenic | -0.236 | Destabilizing | 0.497 | N | 0.56 | neutral | N | 0.498938874 | None | None | I |
K/P | 0.6764 | likely_pathogenic | 0.653 | pathogenic | 0.022 | Stabilizing | 0.726 | D | 0.665 | neutral | None | None | None | None | I |
K/Q | 0.2322 | likely_benign | 0.2155 | benign | -0.299 | Destabilizing | 0.497 | N | 0.591 | neutral | N | 0.489442219 | None | None | I |
K/R | 0.1037 | likely_benign | 0.0962 | benign | -0.347 | Destabilizing | 0.001 | N | 0.187 | neutral | D | 0.527672367 | None | None | I |
K/S | 0.7221 | likely_pathogenic | 0.6738 | pathogenic | -1.004 | Destabilizing | 0.157 | N | 0.522 | neutral | None | None | None | None | I |
K/T | 0.4095 | ambiguous | 0.3512 | ambiguous | -0.677 | Destabilizing | 0.009 | N | 0.29 | neutral | D | 0.534406338 | None | None | I |
K/V | 0.6582 | likely_pathogenic | 0.6109 | pathogenic | 0.022 | Stabilizing | 0.567 | D | 0.581 | neutral | None | None | None | None | I |
K/W | 0.9103 | likely_pathogenic | 0.8882 | pathogenic | -0.119 | Destabilizing | 0.968 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/Y | 0.8076 | likely_pathogenic | 0.7674 | pathogenic | 0.161 | Stabilizing | 0.726 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.