Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6299 | 19120;19121;19122 | chr2:178729143;178729142;178729141 | chr2:179593870;179593869;179593868 |
N2AB | 5982 | 18169;18170;18171 | chr2:178729143;178729142;178729141 | chr2:179593870;179593869;179593868 |
N2A | 5055 | 15388;15389;15390 | chr2:178729143;178729142;178729141 | chr2:179593870;179593869;179593868 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs2079911475 | None | 0.864 | N | 0.587 | 0.21 | 0.344710718752 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs2079911475 | None | 0.864 | N | 0.587 | 0.21 | 0.344710718752 | gnomAD-4.0.0 | 1.88389E-06 | None | None | None | None | I | None | 2.69906E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6257E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1818 | likely_benign | 0.1895 | benign | -0.26 | Destabilizing | 0.645 | D | 0.589 | neutral | D | 0.531384676 | None | None | I |
E/C | 0.8715 | likely_pathogenic | 0.8962 | pathogenic | -0.168 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/D | 0.1593 | likely_benign | 0.1593 | benign | -0.384 | Destabilizing | 0.006 | N | 0.256 | neutral | N | 0.498227631 | None | None | I |
E/F | 0.7992 | likely_pathogenic | 0.8334 | pathogenic | -0.047 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/G | 0.1564 | likely_benign | 0.1724 | benign | -0.455 | Destabilizing | 0.006 | N | 0.335 | neutral | N | 0.496279074 | None | None | I |
E/H | 0.4853 | ambiguous | 0.5189 | ambiguous | 0.365 | Stabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | I |
E/I | 0.4357 | ambiguous | 0.4542 | ambiguous | 0.221 | Stabilizing | 0.945 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/K | 0.1392 | likely_benign | 0.1467 | benign | 0.396 | Stabilizing | 0.645 | D | 0.586 | neutral | D | 0.525839996 | None | None | I |
E/L | 0.4757 | ambiguous | 0.4905 | ambiguous | 0.221 | Stabilizing | 0.945 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/M | 0.5426 | ambiguous | 0.5686 | pathogenic | 0.134 | Stabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | I |
E/N | 0.2869 | likely_benign | 0.3014 | benign | -0.058 | Destabilizing | 0.809 | D | 0.592 | neutral | None | None | None | None | I |
E/P | 0.7363 | likely_pathogenic | 0.739 | pathogenic | 0.081 | Stabilizing | 0.945 | D | 0.661 | neutral | None | None | None | None | I |
E/Q | 0.121 | likely_benign | 0.1276 | benign | -0.003 | Destabilizing | 0.864 | D | 0.587 | neutral | N | 0.512201482 | None | None | I |
E/R | 0.2305 | likely_benign | 0.2547 | benign | 0.684 | Stabilizing | 0.945 | D | 0.631 | neutral | None | None | None | None | I |
E/S | 0.2064 | likely_benign | 0.2143 | benign | -0.184 | Destabilizing | 0.547 | D | 0.551 | neutral | None | None | None | None | I |
E/T | 0.236 | likely_benign | 0.2393 | benign | -0.014 | Destabilizing | 0.894 | D | 0.591 | neutral | None | None | None | None | I |
E/V | 0.262 | likely_benign | 0.2721 | benign | 0.081 | Stabilizing | 0.928 | D | 0.649 | neutral | N | 0.485327616 | None | None | I |
E/W | 0.8988 | likely_pathogenic | 0.9185 | pathogenic | 0.117 | Stabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/Y | 0.6841 | likely_pathogenic | 0.7254 | pathogenic | 0.208 | Stabilizing | 0.981 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.