Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6300 | 19123;19124;19125 | chr2:178729140;178729139;178729138 | chr2:179593867;179593866;179593865 |
N2AB | 5983 | 18172;18173;18174 | chr2:178729140;178729139;178729138 | chr2:179593867;179593866;179593865 |
N2A | 5056 | 15391;15392;15393 | chr2:178729140;178729139;178729138 | chr2:179593867;179593866;179593865 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.996 | N | 0.343 | 0.242 | 0.146414634003 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7042 | likely_pathogenic | 0.6872 | pathogenic | -0.369 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | N |
N/C | 0.8753 | likely_pathogenic | 0.8819 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/D | 0.2103 | likely_benign | 0.226 | benign | 0.291 | Stabilizing | 0.996 | D | 0.378 | neutral | N | 0.40358471 | None | None | N |
N/E | 0.7575 | likely_pathogenic | 0.7505 | pathogenic | 0.272 | Stabilizing | 0.994 | D | 0.376 | neutral | None | None | None | None | N |
N/F | 0.942 | likely_pathogenic | 0.9324 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/G | 0.6678 | likely_pathogenic | 0.6698 | pathogenic | -0.56 | Destabilizing | 0.998 | D | 0.355 | neutral | None | None | None | None | N |
N/H | 0.4498 | ambiguous | 0.4479 | ambiguous | -0.507 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.478951384 | None | None | N |
N/I | 0.7752 | likely_pathogenic | 0.7468 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.496802149 | None | None | N |
N/K | 0.8012 | likely_pathogenic | 0.7871 | pathogenic | 0.139 | Stabilizing | 0.992 | D | 0.449 | neutral | N | 0.489204826 | None | None | N |
N/L | 0.7847 | likely_pathogenic | 0.7572 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
N/M | 0.7821 | likely_pathogenic | 0.7597 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/P | 0.8019 | likely_pathogenic | 0.785 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
N/Q | 0.8099 | likely_pathogenic | 0.7923 | pathogenic | -0.327 | Destabilizing | 0.967 | D | 0.271 | neutral | None | None | None | None | N |
N/R | 0.8653 | likely_pathogenic | 0.8555 | pathogenic | 0.173 | Stabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
N/S | 0.2637 | likely_benign | 0.2718 | benign | -0.175 | Destabilizing | 0.996 | D | 0.343 | neutral | N | 0.473119366 | None | None | N |
N/T | 0.4704 | ambiguous | 0.4523 | ambiguous | -0.037 | Destabilizing | 0.998 | D | 0.492 | neutral | N | 0.461047712 | None | None | N |
N/V | 0.7846 | likely_pathogenic | 0.759 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
N/W | 0.9769 | likely_pathogenic | 0.9727 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
N/Y | 0.5364 | ambiguous | 0.5067 | ambiguous | -0.365 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.485699333 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.