Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6301 | 19126;19127;19128 | chr2:178729137;178729136;178729135 | chr2:179593864;179593863;179593862 |
N2AB | 5984 | 18175;18176;18177 | chr2:178729137;178729136;178729135 | chr2:179593864;179593863;179593862 |
N2A | 5057 | 15394;15395;15396 | chr2:178729137;178729136;178729135 | chr2:179593864;179593863;179593862 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs755238352 | -0.745 | 0.001 | N | 0.135 | 0.063 | 0.115124310173 | gnomAD-2.1.1 | 4.32E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.49E-06 | 0 |
T/S | rs755238352 | -0.745 | 0.001 | N | 0.135 | 0.063 | 0.115124310173 | gnomAD-4.0.0 | 1.63359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92124E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0666 | likely_benign | 0.0658 | benign | -0.984 | Destabilizing | None | N | 0.065 | neutral | N | 0.515548432 | None | None | N |
T/C | 0.2749 | likely_benign | 0.2746 | benign | -0.532 | Destabilizing | 0.356 | N | 0.347 | neutral | None | None | None | None | N |
T/D | 0.2935 | likely_benign | 0.2612 | benign | -0.123 | Destabilizing | 0.072 | N | 0.385 | neutral | None | None | None | None | N |
T/E | 0.208 | likely_benign | 0.1881 | benign | -0.106 | Destabilizing | 0.072 | N | 0.365 | neutral | None | None | None | None | N |
T/F | 0.1434 | likely_benign | 0.1334 | benign | -1.043 | Destabilizing | 0.072 | N | 0.48 | neutral | None | None | None | None | N |
T/G | 0.2205 | likely_benign | 0.2102 | benign | -1.258 | Destabilizing | 0.016 | N | 0.325 | neutral | None | None | None | None | N |
T/H | 0.1745 | likely_benign | 0.1628 | benign | -1.54 | Destabilizing | 0.628 | D | 0.415 | neutral | None | None | None | None | N |
T/I | 0.064 | likely_benign | 0.063 | benign | -0.336 | Destabilizing | None | N | 0.131 | neutral | N | 0.459097716 | None | None | N |
T/K | 0.134 | likely_benign | 0.1232 | benign | -0.686 | Destabilizing | 0.072 | N | 0.363 | neutral | None | None | None | None | N |
T/L | 0.0725 | likely_benign | 0.0743 | benign | -0.336 | Destabilizing | None | N | 0.127 | neutral | None | None | None | None | N |
T/M | 0.0687 | likely_benign | 0.0659 | benign | -0.03 | Destabilizing | 0.214 | N | 0.396 | neutral | None | None | None | None | N |
T/N | 0.1084 | likely_benign | 0.1004 | benign | -0.637 | Destabilizing | 0.055 | N | 0.323 | neutral | N | 0.515104118 | None | None | N |
T/P | 0.4719 | ambiguous | 0.4149 | ambiguous | -0.52 | Destabilizing | 0.106 | N | 0.437 | neutral | N | 0.497417937 | None | None | N |
T/Q | 0.1556 | likely_benign | 0.1479 | benign | -0.769 | Destabilizing | 0.356 | N | 0.434 | neutral | None | None | None | None | N |
T/R | 0.1084 | likely_benign | 0.1002 | benign | -0.527 | Destabilizing | 0.136 | N | 0.437 | neutral | None | None | None | None | N |
T/S | 0.1005 | likely_benign | 0.0966 | benign | -0.968 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.483566416 | None | None | N |
T/V | 0.0612 | likely_benign | 0.0614 | benign | -0.52 | Destabilizing | None | N | 0.064 | neutral | None | None | None | None | N |
T/W | 0.4671 | ambiguous | 0.4186 | ambiguous | -0.951 | Destabilizing | 0.864 | D | 0.419 | neutral | None | None | None | None | N |
T/Y | 0.1717 | likely_benign | 0.1676 | benign | -0.721 | Destabilizing | 0.356 | N | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.