Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6305 | 19138;19139;19140 | chr2:178729125;178729124;178729123 | chr2:179593852;179593851;179593850 |
N2AB | 5988 | 18187;18188;18189 | chr2:178729125;178729124;178729123 | chr2:179593852;179593851;179593850 |
N2A | 5061 | 15406;15407;15408 | chr2:178729125;178729124;178729123 | chr2:179593852;179593851;179593850 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1197830521 | None | 0.391 | N | 0.289 | 0.109 | 0.359963025489 | gnomAD-4.0.0 | 6.87102E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66362E-05 |
L/W | rs1267771409 | -1.331 | 1.0 | N | 0.637 | 0.403 | 0.758618040938 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.27E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2051 | likely_benign | 0.1807 | benign | -1.238 | Destabilizing | 0.992 | D | 0.444 | neutral | None | None | None | None | N |
L/C | 0.5188 | ambiguous | 0.4851 | ambiguous | -0.691 | Destabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | N |
L/D | 0.6445 | likely_pathogenic | 0.6142 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
L/E | 0.2826 | likely_benign | 0.2652 | benign | -0.656 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
L/F | 0.1423 | likely_benign | 0.1285 | benign | -1.007 | Destabilizing | 0.391 | N | 0.289 | neutral | N | 0.460642865 | None | None | N |
L/G | 0.4457 | ambiguous | 0.4075 | ambiguous | -1.486 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
L/H | 0.2482 | likely_benign | 0.2376 | benign | -0.693 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
L/I | 0.1101 | likely_benign | 0.0986 | benign | -0.673 | Destabilizing | 0.983 | D | 0.387 | neutral | None | None | None | None | N |
L/K | 0.2049 | likely_benign | 0.1991 | benign | -0.732 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
L/M | 0.1288 | likely_benign | 0.1185 | benign | -0.469 | Destabilizing | 0.998 | D | 0.439 | neutral | N | 0.460896354 | None | None | N |
L/N | 0.3833 | ambiguous | 0.338 | benign | -0.446 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
L/P | 0.2651 | likely_benign | 0.2506 | benign | -0.828 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
L/Q | 0.1231 | likely_benign | 0.1162 | benign | -0.695 | Destabilizing | 1.0 | D | 0.58 | neutral | None | None | None | None | N |
L/R | 0.154 | likely_benign | 0.1576 | benign | -0.1 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
L/S | 0.2135 | likely_benign | 0.1872 | benign | -0.998 | Destabilizing | 0.998 | D | 0.585 | neutral | N | 0.479989411 | None | None | N |
L/T | 0.2228 | likely_benign | 0.1983 | benign | -0.947 | Destabilizing | 0.998 | D | 0.461 | neutral | None | None | None | None | N |
L/V | 0.1093 | likely_benign | 0.0995 | benign | -0.828 | Destabilizing | 0.543 | D | 0.315 | neutral | N | 0.380497207 | None | None | N |
L/W | 0.2101 | likely_benign | 0.2029 | benign | -1.009 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.476291584 | None | None | N |
L/Y | 0.3357 | likely_benign | 0.3131 | benign | -0.79 | Destabilizing | 0.995 | D | 0.484 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.