Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC630519138;19139;19140 chr2:178729125;178729124;178729123chr2:179593852;179593851;179593850
N2AB598818187;18188;18189 chr2:178729125;178729124;178729123chr2:179593852;179593851;179593850
N2A506115406;15407;15408 chr2:178729125;178729124;178729123chr2:179593852;179593851;179593850
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTG
  • RefSeq wild type template codon: AAC
  • Domain: Ig-47
  • Domain position: 14
  • Structural Position: 23
  • Q(SASA): 0.4845
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1197830521 None 0.391 N 0.289 0.109 0.359963025489 gnomAD-4.0.0 6.87102E-07 None None None None N None 0 0 None 0 0 None 0 0 0 0 1.66362E-05
L/W rs1267771409 -1.331 1.0 N 0.637 0.403 0.758618040938 gnomAD-2.1.1 4.18E-06 None None None None N None 0 0 None 0 0 None 0 None 0 9.27E-06 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2051 likely_benign 0.1807 benign -1.238 Destabilizing 0.992 D 0.444 neutral None None None None N
L/C 0.5188 ambiguous 0.4851 ambiguous -0.691 Destabilizing 1.0 D 0.489 neutral None None None None N
L/D 0.6445 likely_pathogenic 0.6142 pathogenic -0.596 Destabilizing 1.0 D 0.665 neutral None None None None N
L/E 0.2826 likely_benign 0.2652 benign -0.656 Destabilizing 1.0 D 0.661 neutral None None None None N
L/F 0.1423 likely_benign 0.1285 benign -1.007 Destabilizing 0.391 N 0.289 neutral N 0.460642865 None None N
L/G 0.4457 ambiguous 0.4075 ambiguous -1.486 Destabilizing 1.0 D 0.665 neutral None None None None N
L/H 0.2482 likely_benign 0.2376 benign -0.693 Destabilizing 1.0 D 0.667 neutral None None None None N
L/I 0.1101 likely_benign 0.0986 benign -0.673 Destabilizing 0.983 D 0.387 neutral None None None None N
L/K 0.2049 likely_benign 0.1991 benign -0.732 Destabilizing 1.0 D 0.585 neutral None None None None N
L/M 0.1288 likely_benign 0.1185 benign -0.469 Destabilizing 0.998 D 0.439 neutral N 0.460896354 None None N
L/N 0.3833 ambiguous 0.338 benign -0.446 Destabilizing 1.0 D 0.662 neutral None None None None N
L/P 0.2651 likely_benign 0.2506 benign -0.828 Destabilizing 1.0 D 0.66 neutral None None None None N
L/Q 0.1231 likely_benign 0.1162 benign -0.695 Destabilizing 1.0 D 0.58 neutral None None None None N
L/R 0.154 likely_benign 0.1576 benign -0.1 Destabilizing 1.0 D 0.587 neutral None None None None N
L/S 0.2135 likely_benign 0.1872 benign -0.998 Destabilizing 0.998 D 0.585 neutral N 0.479989411 None None N
L/T 0.2228 likely_benign 0.1983 benign -0.947 Destabilizing 0.998 D 0.461 neutral None None None None N
L/V 0.1093 likely_benign 0.0995 benign -0.828 Destabilizing 0.543 D 0.315 neutral N 0.380497207 None None N
L/W 0.2101 likely_benign 0.2029 benign -1.009 Destabilizing 1.0 D 0.637 neutral N 0.476291584 None None N
L/Y 0.3357 likely_benign 0.3131 benign -0.79 Destabilizing 0.995 D 0.484 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.