Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6307 | 19144;19145;19146 | chr2:178729119;178729118;178729117 | chr2:179593846;179593845;179593844 |
N2AB | 5990 | 18193;18194;18195 | chr2:178729119;178729118;178729117 | chr2:179593846;179593845;179593844 |
N2A | 5063 | 15412;15413;15414 | chr2:178729119;178729118;178729117 | chr2:179593846;179593845;179593844 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs758691112 | -0.426 | 0.012 | N | 0.209 | 0.092 | 0.0482279557977 | gnomAD-2.1.1 | 2.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.14268E-04 | None | 0 | None | 0 | 0 | 0 |
S/T | rs758691112 | -0.426 | 0.012 | N | 0.209 | 0.092 | 0.0482279557977 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs758691112 | -0.426 | 0.012 | N | 0.209 | 0.092 | 0.0482279557977 | gnomAD-4.0.0 | 2.58073E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.8714E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0966 | likely_benign | 0.0941 | benign | -0.692 | Destabilizing | 0.325 | N | 0.295 | neutral | None | None | None | None | N |
S/C | 0.1506 | likely_benign | 0.1348 | benign | -0.393 | Destabilizing | 0.997 | D | 0.346 | neutral | N | 0.473279844 | None | None | N |
S/D | 0.2263 | likely_benign | 0.1934 | benign | 0.245 | Stabilizing | 0.842 | D | 0.35 | neutral | None | None | None | None | N |
S/E | 0.3523 | ambiguous | 0.3099 | benign | 0.164 | Stabilizing | 0.842 | D | 0.35 | neutral | None | None | None | None | N |
S/F | 0.2229 | likely_benign | 0.2199 | benign | -1.276 | Destabilizing | 0.974 | D | 0.429 | neutral | None | None | None | None | N |
S/G | 0.0742 | likely_benign | 0.0665 | benign | -0.804 | Destabilizing | 0.002 | N | 0.111 | neutral | N | 0.452168091 | None | None | N |
S/H | 0.2604 | likely_benign | 0.2348 | benign | -1.372 | Destabilizing | 0.991 | D | 0.341 | neutral | None | None | None | None | N |
S/I | 0.2071 | likely_benign | 0.189 | benign | -0.515 | Destabilizing | 0.934 | D | 0.443 | neutral | N | 0.473279844 | None | None | N |
S/K | 0.4261 | ambiguous | 0.3773 | ambiguous | -0.405 | Destabilizing | 0.029 | N | 0.126 | neutral | None | None | None | None | N |
S/L | 0.1431 | likely_benign | 0.1407 | benign | -0.515 | Destabilizing | 0.728 | D | 0.455 | neutral | None | None | None | None | N |
S/M | 0.2043 | likely_benign | 0.1923 | benign | -0.097 | Destabilizing | 0.991 | D | 0.341 | neutral | None | None | None | None | N |
S/N | 0.0907 | likely_benign | 0.0807 | benign | -0.151 | Destabilizing | 0.801 | D | 0.387 | neutral | N | 0.494438788 | None | None | N |
S/P | 0.6453 | likely_pathogenic | 0.6474 | pathogenic | -0.548 | Destabilizing | 0.974 | D | 0.383 | neutral | None | None | None | None | N |
S/Q | 0.3668 | ambiguous | 0.323 | benign | -0.457 | Destabilizing | 0.949 | D | 0.352 | neutral | None | None | None | None | N |
S/R | 0.3726 | ambiguous | 0.3351 | benign | -0.255 | Destabilizing | 0.669 | D | 0.431 | neutral | N | 0.508426806 | None | None | N |
S/T | 0.0802 | likely_benign | 0.0775 | benign | -0.329 | Destabilizing | 0.012 | N | 0.209 | neutral | N | 0.496671017 | None | None | N |
S/V | 0.2121 | likely_benign | 0.1965 | benign | -0.548 | Destabilizing | 0.728 | D | 0.442 | neutral | None | None | None | None | N |
S/W | 0.3957 | ambiguous | 0.3914 | ambiguous | -1.189 | Destabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | N |
S/Y | 0.1693 | likely_benign | 0.1665 | benign | -0.935 | Destabilizing | 0.991 | D | 0.428 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.