Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6308 | 19147;19148;19149 | chr2:178729116;178729115;178729114 | chr2:179593843;179593842;179593841 |
N2AB | 5991 | 18196;18197;18198 | chr2:178729116;178729115;178729114 | chr2:179593843;179593842;179593841 |
N2A | 5064 | 15415;15416;15417 | chr2:178729116;178729115;178729114 | chr2:179593843;179593842;179593841 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1259623992 | -0.801 | 0.523 | N | 0.401 | 0.159 | 0.101711395817 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.24E-06 | 0 |
S/P | rs1259623992 | -0.801 | 0.523 | N | 0.401 | 0.159 | 0.101711395817 | gnomAD-4.0.0 | 2.05991E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70388E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0703 | likely_benign | 0.0677 | benign | -0.622 | Destabilizing | 0.001 | N | 0.102 | neutral | N | 0.448418497 | None | None | N |
S/C | 0.1409 | likely_benign | 0.124 | benign | -0.341 | Destabilizing | 0.794 | D | 0.385 | neutral | N | 0.47685147 | None | None | N |
S/D | 0.3196 | likely_benign | 0.2844 | benign | 0.157 | Stabilizing | 0.002 | N | 0.153 | neutral | None | None | None | None | N |
S/E | 0.3777 | ambiguous | 0.3504 | ambiguous | 0.069 | Stabilizing | 0.129 | N | 0.277 | neutral | None | None | None | None | N |
S/F | 0.1367 | likely_benign | 0.1241 | benign | -1.236 | Destabilizing | 0.655 | D | 0.431 | neutral | N | 0.46820419 | None | None | N |
S/G | 0.1075 | likely_benign | 0.1071 | benign | -0.73 | Destabilizing | 0.129 | N | 0.294 | neutral | None | None | None | None | N |
S/H | 0.267 | likely_benign | 0.2465 | benign | -1.294 | Destabilizing | 0.94 | D | 0.387 | neutral | None | None | None | None | N |
S/I | 0.132 | likely_benign | 0.1164 | benign | -0.46 | Destabilizing | 0.264 | N | 0.393 | neutral | None | None | None | None | N |
S/K | 0.4372 | ambiguous | 0.4036 | ambiguous | -0.407 | Destabilizing | 0.418 | N | 0.264 | neutral | None | None | None | None | N |
S/L | 0.0761 | likely_benign | 0.073 | benign | -0.46 | Destabilizing | 0.129 | N | 0.413 | neutral | None | None | None | None | N |
S/M | 0.1728 | likely_benign | 0.1582 | benign | -0.033 | Destabilizing | 0.027 | N | 0.289 | neutral | None | None | None | None | N |
S/N | 0.136 | likely_benign | 0.1252 | benign | -0.15 | Destabilizing | 0.264 | N | 0.253 | neutral | None | None | None | None | N |
S/P | 0.0955 | likely_benign | 0.0963 | benign | -0.487 | Destabilizing | 0.523 | D | 0.401 | neutral | N | 0.456267189 | None | None | N |
S/Q | 0.3616 | ambiguous | 0.3371 | benign | -0.462 | Destabilizing | 0.836 | D | 0.357 | neutral | None | None | None | None | N |
S/R | 0.3604 | ambiguous | 0.3402 | ambiguous | -0.218 | Destabilizing | 0.716 | D | 0.433 | neutral | None | None | None | None | N |
S/T | 0.07 | likely_benign | 0.0671 | benign | -0.307 | Destabilizing | 0.007 | N | 0.117 | neutral | N | 0.416092648 | None | None | N |
S/V | 0.1274 | likely_benign | 0.1157 | benign | -0.487 | Destabilizing | 0.01 | N | 0.275 | neutral | None | None | None | None | N |
S/W | 0.2636 | likely_benign | 0.2568 | benign | -1.168 | Destabilizing | 0.983 | D | 0.453 | neutral | None | None | None | None | N |
S/Y | 0.1457 | likely_benign | 0.1342 | benign | -0.905 | Destabilizing | 0.921 | D | 0.409 | neutral | N | 0.47659798 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.