Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6309 | 19150;19151;19152 | chr2:178729113;178729112;178729111 | chr2:179593840;179593839;179593838 |
N2AB | 5992 | 18199;18200;18201 | chr2:178729113;178729112;178729111 | chr2:179593840;179593839;179593838 |
N2A | 5065 | 15418;15419;15420 | chr2:178729113;178729112;178729111 | chr2:179593840;179593839;179593838 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.201 | N | 0.643 | 0.326 | 0.148003135375 | gnomAD-4.0.0 | 1.60346E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87523E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6144 | likely_pathogenic | 0.5806 | pathogenic | -1.078 | Destabilizing | 0.982 | D | 0.673 | neutral | None | None | None | None | I |
A/D | 0.9261 | likely_pathogenic | 0.9002 | pathogenic | -0.469 | Destabilizing | 0.638 | D | 0.809 | deleterious | N | 0.509376677 | None | None | I |
A/E | 0.8613 | likely_pathogenic | 0.8294 | pathogenic | -0.461 | Destabilizing | 0.826 | D | 0.807 | deleterious | None | None | None | None | I |
A/F | 0.709 | likely_pathogenic | 0.6686 | pathogenic | -0.855 | Destabilizing | 0.826 | D | 0.805 | deleterious | None | None | None | None | I |
A/G | 0.3475 | ambiguous | 0.3362 | benign | -1.108 | Destabilizing | 0.002 | N | 0.369 | neutral | N | 0.485992503 | None | None | I |
A/H | 0.9201 | likely_pathogenic | 0.8997 | pathogenic | -1.18 | Destabilizing | 0.982 | D | 0.765 | deleterious | None | None | None | None | I |
A/I | 0.2727 | likely_benign | 0.2385 | benign | -0.14 | Destabilizing | 0.25 | N | 0.769 | deleterious | None | None | None | None | I |
A/K | 0.9233 | likely_pathogenic | 0.9037 | pathogenic | -0.866 | Destabilizing | 0.7 | D | 0.807 | deleterious | None | None | None | None | I |
A/L | 0.3606 | ambiguous | 0.3275 | benign | -0.14 | Destabilizing | 0.25 | N | 0.667 | neutral | None | None | None | None | I |
A/M | 0.4186 | ambiguous | 0.3747 | ambiguous | -0.318 | Destabilizing | 0.947 | D | 0.76 | deleterious | None | None | None | None | I |
A/N | 0.8381 | likely_pathogenic | 0.7985 | pathogenic | -0.689 | Destabilizing | 0.7 | D | 0.81 | deleterious | None | None | None | None | I |
A/P | 0.9147 | likely_pathogenic | 0.9026 | pathogenic | -0.32 | Destabilizing | 0.781 | D | 0.815 | deleterious | N | 0.486245992 | None | None | I |
A/Q | 0.8393 | likely_pathogenic | 0.8059 | pathogenic | -0.747 | Destabilizing | 0.826 | D | 0.799 | deleterious | None | None | None | None | I |
A/R | 0.8807 | likely_pathogenic | 0.8585 | pathogenic | -0.693 | Destabilizing | 0.826 | D | 0.811 | deleterious | None | None | None | None | I |
A/S | 0.2072 | likely_benign | 0.194 | benign | -1.212 | Destabilizing | 0.201 | N | 0.643 | neutral | N | 0.482371652 | None | None | I |
A/T | 0.1219 | likely_benign | 0.1135 | benign | -1.075 | Destabilizing | 0.334 | N | 0.677 | prob.neutral | N | 0.494806934 | None | None | I |
A/V | 0.1089 | likely_benign | 0.0985 | benign | -0.32 | Destabilizing | 0.007 | N | 0.291 | neutral | N | 0.38349744 | None | None | I |
A/W | 0.9744 | likely_pathogenic | 0.9664 | pathogenic | -1.172 | Destabilizing | 0.982 | D | 0.736 | prob.delet. | None | None | None | None | I |
A/Y | 0.8944 | likely_pathogenic | 0.875 | pathogenic | -0.727 | Destabilizing | 0.935 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.