Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6315 | 19168;19169;19170 | chr2:178729095;178729094;178729093 | chr2:179593822;179593821;179593820 |
N2AB | 5998 | 18217;18218;18219 | chr2:178729095;178729094;178729093 | chr2:179593822;179593821;179593820 |
N2A | 5071 | 15436;15437;15438 | chr2:178729095;178729094;178729093 | chr2:179593822;179593821;179593820 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs770552574 | -0.461 | 0.996 | D | 0.787 | 0.529 | 0.617849357852 | gnomAD-2.1.1 | 1.64E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13507E-04 | None | 6.66E-05 | None | 0 | 0 | 0 |
V/M | rs770552574 | -0.461 | 0.996 | D | 0.787 | 0.529 | 0.617849357852 | gnomAD-4.0.0 | 1.37044E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.05663E-05 | None | 0 | 0 | 1.35023E-05 | 3.49577E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4801 | ambiguous | 0.5751 | pathogenic | -1.613 | Destabilizing | 0.928 | D | 0.613 | neutral | N | 0.515906296 | None | None | N |
V/C | 0.9411 | likely_pathogenic | 0.9522 | pathogenic | -1.398 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
V/D | 0.9895 | likely_pathogenic | 0.9938 | pathogenic | -1.053 | Destabilizing | 0.997 | D | 0.877 | deleterious | None | None | None | None | N |
V/E | 0.9644 | likely_pathogenic | 0.9756 | pathogenic | -0.863 | Destabilizing | 0.996 | D | 0.864 | deleterious | D | 0.627322745 | None | None | N |
V/F | 0.4186 | ambiguous | 0.4322 | ambiguous | -0.898 | Destabilizing | 0.983 | D | 0.847 | deleterious | None | None | None | None | N |
V/G | 0.8186 | likely_pathogenic | 0.8748 | pathogenic | -2.117 | Highly Destabilizing | 0.989 | D | 0.869 | deleterious | D | 0.595284023 | None | None | N |
V/H | 0.9822 | likely_pathogenic | 0.9859 | pathogenic | -1.729 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/I | 0.0929 | likely_benign | 0.0898 | benign | -0.238 | Destabilizing | 0.05 | N | 0.269 | neutral | None | None | None | None | N |
V/K | 0.9687 | likely_pathogenic | 0.976 | pathogenic | -0.985 | Destabilizing | 0.992 | D | 0.865 | deleterious | None | None | None | None | N |
V/L | 0.3331 | likely_benign | 0.3953 | ambiguous | -0.238 | Destabilizing | 0.698 | D | 0.619 | neutral | D | 0.57612662 | None | None | N |
V/M | 0.3169 | likely_benign | 0.3887 | ambiguous | -0.51 | Destabilizing | 0.996 | D | 0.787 | deleterious | D | 0.601381025 | None | None | N |
V/N | 0.9612 | likely_pathogenic | 0.9752 | pathogenic | -1.144 | Destabilizing | 0.997 | D | 0.901 | deleterious | None | None | None | None | N |
V/P | 0.9708 | likely_pathogenic | 0.9789 | pathogenic | -0.666 | Destabilizing | 0.997 | D | 0.869 | deleterious | None | None | None | None | N |
V/Q | 0.9573 | likely_pathogenic | 0.9677 | pathogenic | -0.987 | Destabilizing | 0.997 | D | 0.889 | deleterious | None | None | None | None | N |
V/R | 0.949 | likely_pathogenic | 0.9597 | pathogenic | -0.984 | Destabilizing | 0.997 | D | 0.896 | deleterious | None | None | None | None | N |
V/S | 0.827 | likely_pathogenic | 0.8813 | pathogenic | -1.95 | Destabilizing | 0.992 | D | 0.857 | deleterious | None | None | None | None | N |
V/T | 0.547 | ambiguous | 0.6533 | pathogenic | -1.602 | Destabilizing | 0.944 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/W | 0.9789 | likely_pathogenic | 0.9813 | pathogenic | -1.2 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.9121 | likely_pathogenic | 0.9224 | pathogenic | -0.82 | Destabilizing | 0.992 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.