Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6316 | 19171;19172;19173 | chr2:178729092;178729091;178729090 | chr2:179593819;179593818;179593817 |
N2AB | 5999 | 18220;18221;18222 | chr2:178729092;178729091;178729090 | chr2:179593819;179593818;179593817 |
N2A | 5072 | 15439;15440;15441 | chr2:178729092;178729091;178729090 | chr2:179593819;179593818;179593817 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.201 | N | 0.326 | 0.069 | 0.185906805712 | gnomAD-4.0.0 | 1.5959E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86421E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4226 | ambiguous | 0.4891 | ambiguous | -0.81 | Destabilizing | 0.977 | D | 0.395 | neutral | None | None | None | None | I |
A/D | 0.2422 | likely_benign | 0.2715 | benign | 0.058 | Stabilizing | 0.447 | N | 0.395 | neutral | None | None | None | None | I |
A/E | 0.1681 | likely_benign | 0.194 | benign | -0.02 | Destabilizing | 0.007 | N | 0.131 | neutral | N | 0.361147095 | None | None | I |
A/F | 0.1958 | likely_benign | 0.2191 | benign | -0.547 | Destabilizing | 0.85 | D | 0.406 | neutral | None | None | None | None | I |
A/G | 0.1506 | likely_benign | 0.1592 | benign | -0.451 | Destabilizing | 0.201 | N | 0.326 | neutral | N | 0.476147469 | None | None | I |
A/H | 0.3031 | likely_benign | 0.3458 | ambiguous | -0.448 | Destabilizing | 0.972 | D | 0.367 | neutral | None | None | None | None | I |
A/I | 0.1433 | likely_benign | 0.1633 | benign | -0.03 | Destabilizing | 0.217 | N | 0.381 | neutral | None | None | None | None | I |
A/K | 0.2175 | likely_benign | 0.2603 | benign | -0.626 | Destabilizing | 0.447 | N | 0.376 | neutral | None | None | None | None | I |
A/L | 0.1167 | likely_benign | 0.1291 | benign | -0.03 | Destabilizing | 0.25 | N | 0.381 | neutral | None | None | None | None | I |
A/M | 0.1533 | likely_benign | 0.1638 | benign | -0.298 | Destabilizing | 0.85 | D | 0.343 | neutral | None | None | None | None | I |
A/N | 0.2024 | likely_benign | 0.2238 | benign | -0.398 | Destabilizing | 0.617 | D | 0.39 | neutral | None | None | None | None | I |
A/P | 0.7315 | likely_pathogenic | 0.809 | pathogenic | -0.077 | Destabilizing | 0.896 | D | 0.385 | neutral | N | 0.491012382 | None | None | I |
A/Q | 0.2161 | likely_benign | 0.2433 | benign | -0.512 | Destabilizing | 0.85 | D | 0.394 | neutral | None | None | None | None | I |
A/R | 0.1917 | likely_benign | 0.2242 | benign | -0.352 | Destabilizing | 0.012 | N | 0.185 | neutral | None | None | None | None | I |
A/S | 0.0844 | likely_benign | 0.0857 | benign | -0.764 | Destabilizing | 0.016 | N | 0.127 | neutral | N | 0.416347017 | None | None | I |
A/T | 0.0701 | likely_benign | 0.0726 | benign | -0.727 | Destabilizing | 0.002 | N | 0.062 | neutral | N | 0.395683743 | None | None | I |
A/V | 0.089 | likely_benign | 0.0971 | benign | -0.077 | Destabilizing | 0.004 | N | 0.163 | neutral | N | 0.465295757 | None | None | I |
A/W | 0.5473 | ambiguous | 0.6011 | pathogenic | -0.788 | Destabilizing | 0.992 | D | 0.467 | neutral | None | None | None | None | I |
A/Y | 0.3018 | likely_benign | 0.3441 | ambiguous | -0.386 | Destabilizing | 0.92 | D | 0.404 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.