Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6318 | 19177;19178;19179 | chr2:178729086;178729085;178729084 | chr2:179593813;179593812;179593811 |
N2AB | 6001 | 18226;18227;18228 | chr2:178729086;178729085;178729084 | chr2:179593813;179593812;179593811 |
N2A | 5074 | 15445;15446;15447 | chr2:178729086;178729085;178729084 | chr2:179593813;179593812;179593811 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.996 | N | 0.54 | 0.429 | 0.706475442758 | gnomAD-4.0.0 | 3.19025E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72646E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1351 | likely_benign | 0.1124 | benign | -0.167 | Destabilizing | 0.026 | N | 0.241 | neutral | N | 0.478166267 | None | None | I |
S/C | 0.2675 | likely_benign | 0.2087 | benign | -0.327 | Destabilizing | 0.996 | D | 0.54 | neutral | N | 0.510357631 | None | None | I |
S/D | 0.6808 | likely_pathogenic | 0.7147 | pathogenic | 0.09 | Stabilizing | 0.959 | D | 0.486 | neutral | None | None | None | None | I |
S/E | 0.7809 | likely_pathogenic | 0.794 | pathogenic | 0.001 | Stabilizing | 0.919 | D | 0.492 | neutral | None | None | None | None | I |
S/F | 0.2561 | likely_benign | 0.2448 | benign | -0.767 | Destabilizing | 0.984 | D | 0.676 | prob.neutral | N | 0.504334148 | None | None | I |
S/G | 0.2439 | likely_benign | 0.2204 | benign | -0.27 | Destabilizing | 0.851 | D | 0.472 | neutral | None | None | None | None | I |
S/H | 0.5609 | ambiguous | 0.5714 | pathogenic | -0.665 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
S/I | 0.3574 | ambiguous | 0.3044 | benign | -0.028 | Destabilizing | 0.976 | D | 0.657 | neutral | None | None | None | None | I |
S/K | 0.8841 | likely_pathogenic | 0.8944 | pathogenic | -0.48 | Destabilizing | 0.919 | D | 0.489 | neutral | None | None | None | None | I |
S/L | 0.1442 | likely_benign | 0.1295 | benign | -0.028 | Destabilizing | 0.851 | D | 0.633 | neutral | None | None | None | None | I |
S/M | 0.3282 | likely_benign | 0.299 | benign | -0.057 | Destabilizing | 0.999 | D | 0.528 | neutral | None | None | None | None | I |
S/N | 0.348 | ambiguous | 0.3395 | benign | -0.194 | Destabilizing | 0.959 | D | 0.52 | neutral | None | None | None | None | I |
S/P | 0.7932 | likely_pathogenic | 0.7853 | pathogenic | -0.045 | Destabilizing | 0.984 | D | 0.515 | neutral | D | 0.529557879 | None | None | I |
S/Q | 0.7396 | likely_pathogenic | 0.7401 | pathogenic | -0.397 | Destabilizing | 0.988 | D | 0.47 | neutral | None | None | None | None | I |
S/R | 0.8481 | likely_pathogenic | 0.8559 | pathogenic | -0.251 | Destabilizing | 0.988 | D | 0.517 | neutral | None | None | None | None | I |
S/T | 0.0989 | likely_benign | 0.1066 | benign | -0.267 | Destabilizing | 0.103 | N | 0.261 | neutral | D | 0.52216776 | None | None | I |
S/V | 0.3448 | ambiguous | 0.2853 | benign | -0.045 | Destabilizing | 0.851 | D | 0.628 | neutral | None | None | None | None | I |
S/W | 0.4891 | ambiguous | 0.4942 | ambiguous | -0.846 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
S/Y | 0.2615 | likely_benign | 0.2498 | benign | -0.536 | Destabilizing | 0.995 | D | 0.669 | neutral | D | 0.52722965 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.