Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6324 | 19195;19196;19197 | chr2:178729068;178729067;178729066 | chr2:179593795;179593794;179593793 |
N2AB | 6007 | 18244;18245;18246 | chr2:178729068;178729067;178729066 | chr2:179593795;179593794;179593793 |
N2A | 5080 | 15463;15464;15465 | chr2:178729068;178729067;178729066 | chr2:179593795;179593794;179593793 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.175 | N | 0.4 | 0.172 | 0.298745278005 | gnomAD-4.0.0 | 3.42357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49911E-06 | 0 | 0 |
T/S | rs2079898671 | None | 0.001 | N | 0.202 | 0.075 | 0.186928172975 | gnomAD-4.0.0 | 1.36943E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79965E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0853 | likely_benign | 0.0846 | benign | -0.904 | Destabilizing | None | N | 0.201 | neutral | N | 0.513510991 | None | None | N |
T/C | 0.3724 | ambiguous | 0.3853 | ambiguous | -0.532 | Destabilizing | 0.667 | D | 0.53 | neutral | None | None | None | None | N |
T/D | 0.3051 | likely_benign | 0.3206 | benign | -0.343 | Destabilizing | 0.22 | N | 0.438 | neutral | None | None | None | None | N |
T/E | 0.2383 | likely_benign | 0.2498 | benign | -0.267 | Destabilizing | 0.055 | N | 0.393 | neutral | None | None | None | None | N |
T/F | 0.1661 | likely_benign | 0.1697 | benign | -0.704 | Destabilizing | 0.497 | N | 0.624 | neutral | None | None | None | None | N |
T/G | 0.2625 | likely_benign | 0.2733 | benign | -1.246 | Destabilizing | 0.055 | N | 0.429 | neutral | None | None | None | None | N |
T/H | 0.185 | likely_benign | 0.1831 | benign | -1.399 | Destabilizing | 0.667 | D | 0.571 | neutral | None | None | None | None | N |
T/I | 0.1072 | likely_benign | 0.1107 | benign | -0.06 | Destabilizing | 0.001 | N | 0.22 | neutral | D | 0.524056059 | None | None | N |
T/K | 0.1692 | likely_benign | 0.1678 | benign | -0.687 | Destabilizing | 0.055 | N | 0.41 | neutral | None | None | None | None | N |
T/L | 0.0847 | likely_benign | 0.0843 | benign | -0.06 | Destabilizing | 0.009 | N | 0.327 | neutral | None | None | None | None | N |
T/M | 0.0844 | likely_benign | 0.0866 | benign | 0.067 | Stabilizing | 0.497 | N | 0.535 | neutral | None | None | None | None | N |
T/N | 0.116 | likely_benign | 0.1186 | benign | -0.84 | Destabilizing | 0.175 | N | 0.4 | neutral | N | 0.497355485 | None | None | N |
T/P | 0.5803 | likely_pathogenic | 0.6046 | pathogenic | -0.307 | Destabilizing | 0.301 | N | 0.49 | neutral | D | 0.534324463 | None | None | N |
T/Q | 0.1772 | likely_benign | 0.1774 | benign | -0.831 | Destabilizing | 0.005 | N | 0.231 | neutral | None | None | None | None | N |
T/R | 0.1324 | likely_benign | 0.1296 | benign | -0.605 | Destabilizing | 0.22 | N | 0.487 | neutral | None | None | None | None | N |
T/S | 0.0923 | likely_benign | 0.0916 | benign | -1.148 | Destabilizing | 0.001 | N | 0.202 | neutral | N | 0.452670389 | None | None | N |
T/V | 0.0996 | likely_benign | 0.1001 | benign | -0.307 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
T/W | 0.4556 | ambiguous | 0.4653 | ambiguous | -0.695 | Destabilizing | 0.958 | D | 0.579 | neutral | None | None | None | None | N |
T/Y | 0.1927 | likely_benign | 0.198 | benign | -0.434 | Destabilizing | 0.667 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.