Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6332 | 19219;19220;19221 | chr2:178729044;178729043;178729042 | chr2:179593771;179593770;179593769 |
N2AB | 6015 | 18268;18269;18270 | chr2:178729044;178729043;178729042 | chr2:179593771;179593770;179593769 |
N2A | 5088 | 15487;15488;15489 | chr2:178729044;178729043;178729042 | chr2:179593771;179593770;179593769 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1441559155 | -1.337 | 0.001 | N | 0.349 | 0.111 | 0.474010150167 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
L/V | rs1441559155 | -1.337 | 0.001 | N | 0.349 | 0.111 | 0.474010150167 | gnomAD-4.0.0 | 1.59358E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43464E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3732 | ambiguous | 0.3451 | ambiguous | -2.11 | Highly Destabilizing | 0.241 | N | 0.481 | neutral | None | None | None | None | N |
L/C | 0.6518 | likely_pathogenic | 0.6356 | pathogenic | -1.474 | Destabilizing | 0.981 | D | 0.566 | neutral | None | None | None | None | N |
L/D | 0.9214 | likely_pathogenic | 0.9033 | pathogenic | -1.632 | Destabilizing | 0.818 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/E | 0.701 | likely_pathogenic | 0.6377 | pathogenic | -1.485 | Destabilizing | 0.69 | D | 0.663 | neutral | None | None | None | None | N |
L/F | 0.2066 | likely_benign | 0.203 | benign | -1.246 | Destabilizing | 0.003 | N | 0.361 | neutral | N | 0.508353985 | None | None | N |
L/G | 0.8028 | likely_pathogenic | 0.7664 | pathogenic | -2.566 | Highly Destabilizing | 0.818 | D | 0.644 | neutral | None | None | None | None | N |
L/H | 0.5197 | ambiguous | 0.4695 | ambiguous | -1.663 | Destabilizing | 0.008 | N | 0.52 | neutral | D | 0.535865989 | None | None | N |
L/I | 0.0637 | likely_benign | 0.0634 | benign | -0.848 | Destabilizing | 0.001 | N | 0.231 | neutral | N | 0.427857663 | None | None | N |
L/K | 0.5908 | likely_pathogenic | 0.5228 | ambiguous | -1.584 | Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | N |
L/M | 0.1389 | likely_benign | 0.135 | benign | -0.801 | Destabilizing | 0.69 | D | 0.497 | neutral | None | None | None | None | N |
L/N | 0.7482 | likely_pathogenic | 0.7122 | pathogenic | -1.713 | Destabilizing | 0.69 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/P | 0.7098 | likely_pathogenic | 0.6638 | pathogenic | -1.243 | Destabilizing | 0.912 | D | 0.701 | prob.neutral | D | 0.52409161 | None | None | N |
L/Q | 0.4457 | ambiguous | 0.3749 | ambiguous | -1.665 | Destabilizing | 0.818 | D | 0.661 | neutral | None | None | None | None | N |
L/R | 0.4681 | ambiguous | 0.4008 | ambiguous | -1.193 | Destabilizing | 0.627 | D | 0.653 | neutral | D | 0.52886455 | None | None | N |
L/S | 0.5818 | likely_pathogenic | 0.5297 | ambiguous | -2.436 | Highly Destabilizing | 0.69 | D | 0.583 | neutral | None | None | None | None | N |
L/T | 0.3131 | likely_benign | 0.2948 | benign | -2.137 | Highly Destabilizing | 0.388 | N | 0.5 | neutral | None | None | None | None | N |
L/V | 0.0829 | likely_benign | 0.0805 | benign | -1.243 | Destabilizing | 0.001 | N | 0.349 | neutral | N | 0.446483496 | None | None | N |
L/W | 0.4341 | ambiguous | 0.4065 | ambiguous | -1.4 | Destabilizing | 0.981 | D | 0.671 | neutral | None | None | None | None | N |
L/Y | 0.5895 | likely_pathogenic | 0.5661 | pathogenic | -1.158 | Destabilizing | 0.527 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.