Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6333 | 19222;19223;19224 | chr2:178729041;178729040;178729039 | chr2:179593768;179593767;179593766 |
N2AB | 6016 | 18271;18272;18273 | chr2:178729041;178729040;178729039 | chr2:179593768;179593767;179593766 |
N2A | 5089 | 15490;15491;15492 | chr2:178729041;178729040;178729039 | chr2:179593768;179593767;179593766 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1275885460 | 0.21 | 0.741 | N | 0.364 | 0.237 | 0.467161347466 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/Y | rs1275885460 | 0.21 | 0.741 | N | 0.364 | 0.237 | 0.467161347466 | gnomAD-4.0.0 | 1.59366E-06 | None | None | None | None | I | None | 0 | 2.2941E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.075 | likely_benign | 0.0731 | benign | 0.116 | Stabilizing | 0.001 | N | 0.196 | neutral | N | 0.441840107 | None | None | I |
D/C | 0.2771 | likely_benign | 0.2738 | benign | -0.195 | Destabilizing | 0.935 | D | 0.353 | neutral | None | None | None | None | I |
D/E | 0.0702 | likely_benign | 0.0708 | benign | -0.273 | Destabilizing | None | N | 0.17 | neutral | N | 0.415904299 | None | None | I |
D/F | 0.2608 | likely_benign | 0.2408 | benign | 0.163 | Stabilizing | 0.791 | D | 0.365 | neutral | None | None | None | None | I |
D/G | 0.0819 | likely_benign | 0.0746 | benign | -0.032 | Destabilizing | 0.027 | N | 0.387 | neutral | N | 0.424467855 | None | None | I |
D/H | 0.0994 | likely_benign | 0.0953 | benign | 0.776 | Stabilizing | 0.317 | N | 0.345 | neutral | N | 0.460292582 | None | None | I |
D/I | 0.1315 | likely_benign | 0.1297 | benign | 0.443 | Stabilizing | 0.555 | D | 0.371 | neutral | None | None | None | None | I |
D/K | 0.0894 | likely_benign | 0.0835 | benign | 0.492 | Stabilizing | 0.035 | N | 0.374 | neutral | None | None | None | None | I |
D/L | 0.1282 | likely_benign | 0.1232 | benign | 0.443 | Stabilizing | 0.149 | N | 0.395 | neutral | None | None | None | None | I |
D/M | 0.2412 | likely_benign | 0.236 | benign | 0.142 | Stabilizing | 0.935 | D | 0.342 | neutral | None | None | None | None | I |
D/N | 0.0696 | likely_benign | 0.0674 | benign | 0.076 | Stabilizing | None | N | 0.173 | neutral | N | 0.445725774 | None | None | I |
D/P | 0.2649 | likely_benign | 0.223 | benign | 0.355 | Stabilizing | 0.262 | N | 0.381 | neutral | None | None | None | None | I |
D/Q | 0.0982 | likely_benign | 0.0938 | benign | 0.123 | Stabilizing | 0.081 | N | 0.334 | neutral | None | None | None | None | I |
D/R | 0.1084 | likely_benign | 0.0989 | benign | 0.781 | Stabilizing | 0.081 | N | 0.361 | neutral | None | None | None | None | I |
D/S | 0.0723 | likely_benign | 0.0711 | benign | 0.012 | Stabilizing | 0.035 | N | 0.357 | neutral | None | None | None | None | I |
D/T | 0.0953 | likely_benign | 0.0938 | benign | 0.144 | Stabilizing | 0.149 | N | 0.375 | neutral | None | None | None | None | I |
D/V | 0.0817 | likely_benign | 0.0831 | benign | 0.355 | Stabilizing | 0.117 | N | 0.393 | neutral | N | 0.440533385 | None | None | I |
D/W | 0.5297 | ambiguous | 0.4819 | ambiguous | 0.224 | Stabilizing | 0.935 | D | 0.446 | neutral | None | None | None | None | I |
D/Y | 0.1114 | likely_benign | 0.1037 | benign | 0.4 | Stabilizing | 0.741 | D | 0.364 | neutral | N | 0.493135719 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.