Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6337 | 19234;19235;19236 | chr2:178729029;178729028;178729027 | chr2:179593756;179593755;179593754 |
N2AB | 6020 | 18283;18284;18285 | chr2:178729029;178729028;178729027 | chr2:179593756;179593755;179593754 |
N2A | 5093 | 15502;15503;15504 | chr2:178729029;178729028;178729027 | chr2:179593756;179593755;179593754 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.065 | N | 0.122 | 0.105 | 0.0884992946249 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43484E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2253 | likely_benign | 0.1686 | benign | -0.631 | Destabilizing | 0.329 | N | 0.331 | neutral | None | None | None | None | N |
N/C | 0.2916 | likely_benign | 0.2363 | benign | 0.306 | Stabilizing | 0.995 | D | 0.509 | neutral | None | None | None | None | N |
N/D | 0.1235 | likely_benign | 0.1052 | benign | -0.59 | Destabilizing | 0.642 | D | 0.313 | neutral | N | 0.450310063 | None | None | N |
N/E | 0.3729 | ambiguous | 0.2872 | benign | -0.555 | Destabilizing | 0.495 | N | 0.281 | neutral | None | None | None | None | N |
N/F | 0.5059 | ambiguous | 0.4134 | ambiguous | -0.661 | Destabilizing | 0.807 | D | 0.545 | neutral | None | None | None | None | N |
N/G | 0.277 | likely_benign | 0.2227 | benign | -0.915 | Destabilizing | 0.495 | N | 0.277 | neutral | None | None | None | None | N |
N/H | 0.1002 | likely_benign | 0.0883 | benign | -0.928 | Destabilizing | 0.013 | N | 0.188 | neutral | N | 0.488896895 | None | None | N |
N/I | 0.242 | likely_benign | 0.1858 | benign | 0.066 | Stabilizing | 0.863 | D | 0.539 | neutral | N | 0.466630346 | None | None | N |
N/K | 0.2332 | likely_benign | 0.1825 | benign | -0.223 | Destabilizing | 0.01 | N | 0.093 | neutral | N | 0.462939658 | None | None | N |
N/L | 0.2496 | likely_benign | 0.1982 | benign | 0.066 | Stabilizing | 0.543 | D | 0.453 | neutral | None | None | None | None | N |
N/M | 0.3383 | likely_benign | 0.2739 | benign | 0.693 | Stabilizing | 0.981 | D | 0.459 | neutral | None | None | None | None | N |
N/P | 0.7516 | likely_pathogenic | 0.6611 | pathogenic | -0.137 | Destabilizing | 0.944 | D | 0.509 | neutral | None | None | None | None | N |
N/Q | 0.3167 | likely_benign | 0.2446 | benign | -0.79 | Destabilizing | 0.704 | D | 0.403 | neutral | None | None | None | None | N |
N/R | 0.2468 | likely_benign | 0.1966 | benign | -0.204 | Destabilizing | 0.543 | D | 0.298 | neutral | None | None | None | None | N |
N/S | 0.0841 | likely_benign | 0.077 | benign | -0.599 | Destabilizing | 0.065 | N | 0.122 | neutral | N | 0.477949183 | None | None | N |
N/T | 0.13 | likely_benign | 0.1071 | benign | -0.397 | Destabilizing | 0.473 | N | 0.279 | neutral | N | 0.459780264 | None | None | N |
N/V | 0.2415 | likely_benign | 0.1902 | benign | -0.137 | Destabilizing | 0.704 | D | 0.523 | neutral | None | None | None | None | N |
N/W | 0.7867 | likely_pathogenic | 0.7067 | pathogenic | -0.525 | Destabilizing | 0.985 | D | 0.51 | neutral | None | None | None | None | N |
N/Y | 0.1821 | likely_benign | 0.1542 | benign | -0.302 | Destabilizing | 0.006 | N | 0.324 | neutral | N | 0.461528238 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.