Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6343 | 19252;19253;19254 | chr2:178729011;178729010;178729009 | chr2:179593738;179593737;179593736 |
N2AB | 6026 | 18301;18302;18303 | chr2:178729011;178729010;178729009 | chr2:179593738;179593737;179593736 |
N2A | 5099 | 15520;15521;15522 | chr2:178729011;178729010;178729009 | chr2:179593738;179593737;179593736 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.075 | 0.129 | 0.486209434461 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86056E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0828 | likely_benign | 0.0801 | benign | -0.431 | Destabilizing | None | N | 0.075 | neutral | N | 0.464351607 | None | None | I |
V/C | 0.6018 | likely_pathogenic | 0.5825 | pathogenic | -0.761 | Destabilizing | 0.864 | D | 0.323 | neutral | None | None | None | None | I |
V/D | 0.1363 | likely_benign | 0.1248 | benign | 0.227 | Stabilizing | 0.016 | N | 0.329 | neutral | None | None | None | None | I |
V/E | 0.1077 | likely_benign | 0.095 | benign | 0.14 | Stabilizing | None | N | 0.167 | neutral | N | 0.364224685 | None | None | I |
V/F | 0.1138 | likely_benign | 0.1089 | benign | -0.513 | Destabilizing | 0.628 | D | 0.365 | neutral | None | None | None | None | I |
V/G | 0.1165 | likely_benign | 0.1169 | benign | -0.565 | Destabilizing | 0.024 | N | 0.311 | neutral | N | 0.463602246 | None | None | I |
V/H | 0.2319 | likely_benign | 0.2221 | benign | -0.033 | Destabilizing | 0.356 | N | 0.42 | neutral | None | None | None | None | I |
V/I | 0.0753 | likely_benign | 0.0728 | benign | -0.221 | Destabilizing | 0.061 | N | 0.219 | neutral | None | None | None | None | I |
V/K | 0.1032 | likely_benign | 0.1042 | benign | -0.309 | Destabilizing | 0.016 | N | 0.279 | neutral | None | None | None | None | I |
V/L | 0.1296 | likely_benign | 0.126 | benign | -0.221 | Destabilizing | 0.024 | N | 0.223 | neutral | N | 0.446997998 | None | None | I |
V/M | 0.1008 | likely_benign | 0.0961 | benign | -0.436 | Destabilizing | 0.56 | D | 0.295 | neutral | D | 0.524381346 | None | None | I |
V/N | 0.1194 | likely_benign | 0.1145 | benign | -0.181 | Destabilizing | 0.072 | N | 0.407 | neutral | None | None | None | None | I |
V/P | 0.4726 | ambiguous | 0.5481 | ambiguous | -0.257 | Destabilizing | 0.136 | N | 0.394 | neutral | None | None | None | None | I |
V/Q | 0.1188 | likely_benign | 0.1093 | benign | -0.333 | Destabilizing | 0.038 | N | 0.35 | neutral | None | None | None | None | I |
V/R | 0.0992 | likely_benign | 0.1041 | benign | 0.107 | Stabilizing | 0.038 | N | 0.41 | neutral | None | None | None | None | I |
V/S | 0.0892 | likely_benign | 0.0887 | benign | -0.626 | Destabilizing | 0.016 | N | 0.305 | neutral | None | None | None | None | I |
V/T | 0.0808 | likely_benign | 0.0777 | benign | -0.602 | Destabilizing | 0.031 | N | 0.158 | neutral | None | None | None | None | I |
V/W | 0.5565 | ambiguous | 0.5474 | ambiguous | -0.585 | Destabilizing | 0.864 | D | 0.435 | neutral | None | None | None | None | I |
V/Y | 0.3376 | likely_benign | 0.3306 | benign | -0.3 | Destabilizing | 0.628 | D | 0.362 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.