Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC634319252;19253;19254 chr2:178729011;178729010;178729009chr2:179593738;179593737;179593736
N2AB602618301;18302;18303 chr2:178729011;178729010;178729009chr2:179593738;179593737;179593736
N2A509915520;15521;15522 chr2:178729011;178729010;178729009chr2:179593738;179593737;179593736
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTG
  • RefSeq wild type template codon: CAC
  • Domain: Ig-47
  • Domain position: 52
  • Structural Position: 130
  • Q(SASA): 0.4322
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/A None None None N 0.075 0.129 0.486209434461 gnomAD-4.0.0 1.59318E-06 None None None None I None 0 0 None 0 0 None 0 0 2.86056E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.0828 likely_benign 0.0801 benign -0.431 Destabilizing None N 0.075 neutral N 0.464351607 None None I
V/C 0.6018 likely_pathogenic 0.5825 pathogenic -0.761 Destabilizing 0.864 D 0.323 neutral None None None None I
V/D 0.1363 likely_benign 0.1248 benign 0.227 Stabilizing 0.016 N 0.329 neutral None None None None I
V/E 0.1077 likely_benign 0.095 benign 0.14 Stabilizing None N 0.167 neutral N 0.364224685 None None I
V/F 0.1138 likely_benign 0.1089 benign -0.513 Destabilizing 0.628 D 0.365 neutral None None None None I
V/G 0.1165 likely_benign 0.1169 benign -0.565 Destabilizing 0.024 N 0.311 neutral N 0.463602246 None None I
V/H 0.2319 likely_benign 0.2221 benign -0.033 Destabilizing 0.356 N 0.42 neutral None None None None I
V/I 0.0753 likely_benign 0.0728 benign -0.221 Destabilizing 0.061 N 0.219 neutral None None None None I
V/K 0.1032 likely_benign 0.1042 benign -0.309 Destabilizing 0.016 N 0.279 neutral None None None None I
V/L 0.1296 likely_benign 0.126 benign -0.221 Destabilizing 0.024 N 0.223 neutral N 0.446997998 None None I
V/M 0.1008 likely_benign 0.0961 benign -0.436 Destabilizing 0.56 D 0.295 neutral D 0.524381346 None None I
V/N 0.1194 likely_benign 0.1145 benign -0.181 Destabilizing 0.072 N 0.407 neutral None None None None I
V/P 0.4726 ambiguous 0.5481 ambiguous -0.257 Destabilizing 0.136 N 0.394 neutral None None None None I
V/Q 0.1188 likely_benign 0.1093 benign -0.333 Destabilizing 0.038 N 0.35 neutral None None None None I
V/R 0.0992 likely_benign 0.1041 benign 0.107 Stabilizing 0.038 N 0.41 neutral None None None None I
V/S 0.0892 likely_benign 0.0887 benign -0.626 Destabilizing 0.016 N 0.305 neutral None None None None I
V/T 0.0808 likely_benign 0.0777 benign -0.602 Destabilizing 0.031 N 0.158 neutral None None None None I
V/W 0.5565 ambiguous 0.5474 ambiguous -0.585 Destabilizing 0.864 D 0.435 neutral None None None None I
V/Y 0.3376 likely_benign 0.3306 benign -0.3 Destabilizing 0.628 D 0.362 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.