Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6344 | 19255;19256;19257 | chr2:178729008;178729007;178729006 | chr2:179593735;179593734;179593733 |
N2AB | 6027 | 18304;18305;18306 | chr2:178729008;178729007;178729006 | chr2:179593735;179593734;179593733 |
N2A | 5100 | 15523;15524;15525 | chr2:178729008;178729007;178729006 | chr2:179593735;179593734;179593733 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs750787195 | -0.151 | 0.012 | N | 0.19 | 0.057 | 0.0762999501168 | gnomAD-4.0.0 | 8.21481E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07964E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1969 | likely_benign | 0.1958 | benign | -0.004 | Destabilizing | 0.024 | N | 0.262 | neutral | N | 0.457199825 | None | None | I |
D/C | 0.5583 | ambiguous | 0.5801 | pathogenic | -0.274 | Destabilizing | 0.864 | D | 0.234 | neutral | None | None | None | None | I |
D/E | 0.1856 | likely_benign | 0.181 | benign | -0.43 | Destabilizing | 0.012 | N | 0.19 | neutral | N | 0.439238866 | None | None | I |
D/F | 0.6667 | likely_pathogenic | 0.6663 | pathogenic | -0.02 | Destabilizing | 0.628 | D | 0.27 | neutral | None | None | None | None | I |
D/G | 0.1035 | likely_benign | 0.1045 | benign | -0.116 | Destabilizing | 0.005 | N | 0.224 | neutral | N | 0.457320408 | None | None | I |
D/H | 0.1799 | likely_benign | 0.1997 | benign | 0.642 | Stabilizing | 0.171 | N | 0.269 | neutral | N | 0.463556154 | None | None | I |
D/I | 0.6274 | likely_pathogenic | 0.6231 | pathogenic | 0.226 | Stabilizing | 0.356 | N | 0.313 | neutral | None | None | None | None | I |
D/K | 0.2912 | likely_benign | 0.3135 | benign | 0.42 | Stabilizing | 0.016 | N | 0.27 | neutral | None | None | None | None | I |
D/L | 0.4993 | ambiguous | 0.4981 | ambiguous | 0.226 | Stabilizing | 0.072 | N | 0.314 | neutral | None | None | None | None | I |
D/M | 0.7003 | likely_pathogenic | 0.698 | pathogenic | -0.032 | Destabilizing | 0.628 | D | 0.235 | neutral | None | None | None | None | I |
D/N | 0.0613 | likely_benign | 0.0633 | benign | 0.008 | Stabilizing | None | N | 0.091 | neutral | N | 0.413727133 | None | None | I |
D/P | 0.6197 | likely_pathogenic | 0.6398 | pathogenic | 0.168 | Stabilizing | 0.136 | N | 0.309 | neutral | None | None | None | None | I |
D/Q | 0.2721 | likely_benign | 0.2817 | benign | 0.03 | Stabilizing | 0.072 | N | 0.199 | neutral | None | None | None | None | I |
D/R | 0.3068 | likely_benign | 0.3265 | benign | 0.68 | Stabilizing | 0.072 | N | 0.311 | neutral | None | None | None | None | I |
D/S | 0.1031 | likely_benign | 0.1069 | benign | -0.026 | Destabilizing | 0.007 | N | 0.157 | neutral | None | None | None | None | I |
D/T | 0.3184 | likely_benign | 0.3168 | benign | 0.076 | Stabilizing | 0.016 | N | 0.303 | neutral | None | None | None | None | I |
D/V | 0.4571 | ambiguous | 0.4499 | ambiguous | 0.168 | Stabilizing | 0.106 | N | 0.339 | neutral | N | 0.472456924 | None | None | I |
D/W | 0.841 | likely_pathogenic | 0.8468 | pathogenic | 0.036 | Stabilizing | 0.864 | D | 0.343 | neutral | None | None | None | None | I |
D/Y | 0.2387 | likely_benign | 0.2536 | benign | 0.203 | Stabilizing | 0.56 | D | 0.277 | neutral | N | 0.472456924 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.