Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6349 | 19270;19271;19272 | chr2:178728993;178728992;178728991 | chr2:179593720;179593719;179593718 |
N2AB | 6032 | 18319;18320;18321 | chr2:178728993;178728992;178728991 | chr2:179593720;179593719;179593718 |
N2A | 5105 | 15538;15539;15540 | chr2:178728993;178728992;178728991 | chr2:179593720;179593719;179593718 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs2079884280 | None | 0.688 | D | 0.706 | 0.398 | 0.591171394266 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/I | rs2079884280 | None | 0.688 | D | 0.706 | 0.398 | 0.591171394266 | gnomAD-4.0.0 | 6.57428E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9149 | likely_pathogenic | 0.9258 | pathogenic | -2.298 | Highly Destabilizing | 0.895 | D | 0.783 | deleterious | None | None | None | None | N |
L/C | 0.8862 | likely_pathogenic | 0.8923 | pathogenic | -1.56 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.092 | Highly Destabilizing | 0.997 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | -2.764 | Highly Destabilizing | 0.992 | D | 0.883 | deleterious | None | None | None | None | N |
L/F | 0.4792 | ambiguous | 0.4995 | ambiguous | -1.416 | Destabilizing | 0.978 | D | 0.785 | deleterious | D | 0.552969513 | None | None | N |
L/G | 0.984 | likely_pathogenic | 0.9867 | pathogenic | -2.897 | Highly Destabilizing | 0.992 | D | 0.885 | deleterious | None | None | None | None | N |
L/H | 0.9864 | likely_pathogenic | 0.9889 | pathogenic | -2.835 | Highly Destabilizing | 0.999 | D | 0.904 | deleterious | D | 0.57573503 | None | None | N |
L/I | 0.2847 | likely_benign | 0.255 | benign | -0.492 | Destabilizing | 0.688 | D | 0.706 | prob.neutral | D | 0.544549268 | None | None | N |
L/K | 0.9932 | likely_pathogenic | 0.9946 | pathogenic | -1.716 | Destabilizing | 0.992 | D | 0.885 | deleterious | None | None | None | None | N |
L/M | 0.2935 | likely_benign | 0.324 | benign | -0.756 | Destabilizing | 0.983 | D | 0.779 | deleterious | None | None | None | None | N |
L/N | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -2.482 | Highly Destabilizing | 0.997 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9974 | likely_pathogenic | 0.9976 | pathogenic | -1.086 | Destabilizing | 0.996 | D | 0.905 | deleterious | D | 0.587091335 | None | None | N |
L/Q | 0.978 | likely_pathogenic | 0.9837 | pathogenic | -2.058 | Highly Destabilizing | 0.997 | D | 0.909 | deleterious | None | None | None | None | N |
L/R | 0.9814 | likely_pathogenic | 0.984 | pathogenic | -2.021 | Highly Destabilizing | 0.989 | D | 0.903 | deleterious | D | 0.587091335 | None | None | N |
L/S | 0.9881 | likely_pathogenic | 0.9905 | pathogenic | -2.958 | Highly Destabilizing | 0.983 | D | 0.879 | deleterious | None | None | None | None | N |
L/T | 0.9734 | likely_pathogenic | 0.9769 | pathogenic | -2.457 | Highly Destabilizing | 0.983 | D | 0.818 | deleterious | None | None | None | None | N |
L/V | 0.2995 | likely_benign | 0.2973 | benign | -1.086 | Destabilizing | 0.039 | N | 0.425 | neutral | D | 0.545816716 | None | None | N |
L/W | 0.9576 | likely_pathogenic | 0.9608 | pathogenic | -1.809 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
L/Y | 0.957 | likely_pathogenic | 0.9585 | pathogenic | -1.573 | Destabilizing | 0.992 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.