Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6353 | 19282;19283;19284 | chr2:178728981;178728980;178728979 | chr2:179593708;179593707;179593706 |
N2AB | 6036 | 18331;18332;18333 | chr2:178728981;178728980;178728979 | chr2:179593708;179593707;179593706 |
N2A | 5109 | 15550;15551;15552 | chr2:178728981;178728980;178728979 | chr2:179593708;179593707;179593706 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.055 | N | 0.475 | 0.07 | 0.0482279557977 | gnomAD-4.0.0 | 1.36902E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.066 | likely_benign | 0.0654 | benign | -0.752 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
S/C | 0.1093 | likely_benign | 0.106 | benign | -0.513 | Destabilizing | 0.295 | N | 0.407 | neutral | N | 0.492865357 | None | None | N |
S/D | 0.1603 | likely_benign | 0.132 | benign | -0.551 | Destabilizing | 0.038 | N | 0.275 | neutral | None | None | None | None | N |
S/E | 0.222 | likely_benign | 0.196 | benign | -0.58 | Destabilizing | 0.031 | N | 0.276 | neutral | None | None | None | None | N |
S/F | 0.1099 | likely_benign | 0.1062 | benign | -1.141 | Destabilizing | 0.214 | N | 0.48 | neutral | None | None | None | None | N |
S/G | 0.0941 | likely_benign | 0.0871 | benign | -0.961 | Destabilizing | 0.012 | N | 0.282 | neutral | N | 0.482586999 | None | None | N |
S/H | 0.1554 | likely_benign | 0.1371 | benign | -1.538 | Destabilizing | 0.001 | N | 0.285 | neutral | None | None | None | None | N |
S/I | 0.1248 | likely_benign | 0.1122 | benign | -0.308 | Destabilizing | 0.029 | N | 0.451 | neutral | N | 0.492865357 | None | None | N |
S/K | 0.263 | likely_benign | 0.2295 | benign | -0.787 | Destabilizing | 0.072 | N | 0.279 | neutral | None | None | None | None | N |
S/L | 0.0752 | likely_benign | 0.075 | benign | -0.308 | Destabilizing | 0.006 | N | 0.372 | neutral | None | None | None | None | N |
S/M | 0.1093 | likely_benign | 0.1021 | benign | 0.171 | Stabilizing | 0.002 | N | 0.352 | neutral | None | None | None | None | N |
S/N | 0.0843 | likely_benign | 0.0739 | benign | -0.745 | Destabilizing | None | N | 0.123 | neutral | N | 0.431173956 | None | None | N |
S/P | 0.4425 | ambiguous | 0.4096 | ambiguous | -0.424 | Destabilizing | 0.072 | N | 0.458 | neutral | None | None | None | None | N |
S/Q | 0.2304 | likely_benign | 0.1992 | benign | -0.978 | Destabilizing | 0.072 | N | 0.353 | neutral | None | None | None | None | N |
S/R | 0.2121 | likely_benign | 0.1884 | benign | -0.605 | Destabilizing | 0.055 | N | 0.475 | neutral | N | 0.445588835 | None | None | N |
S/T | 0.0697 | likely_benign | 0.0665 | benign | -0.753 | Destabilizing | None | N | 0.155 | neutral | N | 0.453174127 | None | None | N |
S/V | 0.1154 | likely_benign | 0.1095 | benign | -0.424 | Destabilizing | 0.001 | N | 0.259 | neutral | None | None | None | None | N |
S/W | 0.1857 | likely_benign | 0.1708 | benign | -1.117 | Destabilizing | 0.864 | D | 0.475 | neutral | None | None | None | None | N |
S/Y | 0.0979 | likely_benign | 0.0917 | benign | -0.85 | Destabilizing | 0.214 | N | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.