Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6356 | 19291;19292;19293 | chr2:178728972;178728971;178728970 | chr2:179593699;179593698;179593697 |
N2AB | 6039 | 18340;18341;18342 | chr2:178728972;178728971;178728970 | chr2:179593699;179593698;179593697 |
N2A | 5112 | 15559;15560;15561 | chr2:178728972;178728971;178728970 | chr2:179593699;179593698;179593697 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | rs773854949 | 0.406 | 0.178 | N | 0.237 | 0.158 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/I | rs773854949 | 0.406 | 0.178 | N | 0.237 | 0.158 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/I | rs773854949 | 0.406 | 0.178 | N | 0.237 | 0.158 | None | gnomAD-4.0.0 | 7.43953E-06 | None | None | None | None | N | None | 1.33515E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32554E-06 | 0 | 0 |
N/S | None | None | 0.017 | N | 0.057 | 0.1 | 0.0611884634855 | gnomAD-4.0.0 | 6.84532E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99651E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1101 | likely_benign | 0.0909 | benign | -0.413 | Destabilizing | 0.003 | N | 0.101 | neutral | None | None | None | None | N |
N/C | 0.1982 | likely_benign | 0.1558 | benign | 0.329 | Stabilizing | 0.968 | D | 0.343 | neutral | None | None | None | None | N |
N/D | 0.0955 | likely_benign | 0.0848 | benign | 0.115 | Stabilizing | 0.302 | N | 0.147 | neutral | N | 0.406049012 | None | None | N |
N/E | 0.1937 | likely_benign | 0.1567 | benign | 0.089 | Stabilizing | 0.365 | N | 0.173 | neutral | None | None | None | None | N |
N/F | 0.285 | likely_benign | 0.2274 | benign | -0.736 | Destabilizing | 0.41 | N | 0.397 | neutral | None | None | None | None | N |
N/G | 0.1594 | likely_benign | 0.1312 | benign | -0.602 | Destabilizing | 0.2 | N | 0.166 | neutral | None | None | None | None | N |
N/H | 0.0776 | likely_benign | 0.0715 | benign | -0.616 | Destabilizing | 0.882 | D | 0.189 | neutral | N | 0.4086466 | None | None | N |
N/I | 0.0992 | likely_benign | 0.08 | benign | None | Stabilizing | 0.178 | N | 0.237 | neutral | N | 0.373032517 | None | None | N |
N/K | 0.1256 | likely_benign | 0.1068 | benign | 0.061 | Stabilizing | 0.302 | N | 0.169 | neutral | N | 0.358063064 | None | None | N |
N/L | 0.1251 | likely_benign | 0.1064 | benign | None | Stabilizing | 0.002 | N | 0.141 | neutral | None | None | None | None | N |
N/M | 0.1967 | likely_benign | 0.1598 | benign | 0.362 | Stabilizing | 0.83 | D | 0.367 | neutral | None | None | None | None | N |
N/P | 0.2415 | likely_benign | 0.1965 | benign | -0.11 | Destabilizing | 0.738 | D | 0.364 | neutral | None | None | None | None | N |
N/Q | 0.1879 | likely_benign | 0.1528 | benign | -0.395 | Destabilizing | 0.738 | D | 0.154 | neutral | None | None | None | None | N |
N/R | 0.1323 | likely_benign | 0.1153 | benign | 0.1 | Stabilizing | 0.738 | D | 0.152 | neutral | None | None | None | None | N |
N/S | 0.063 | likely_benign | 0.0587 | benign | -0.191 | Destabilizing | 0.017 | N | 0.057 | neutral | N | 0.324817282 | None | None | N |
N/T | 0.0844 | likely_benign | 0.0734 | benign | -0.066 | Destabilizing | 0.006 | N | 0.058 | neutral | N | 0.330204459 | None | None | N |
N/V | 0.1118 | likely_benign | 0.0911 | benign | -0.11 | Destabilizing | 0.008 | N | 0.143 | neutral | None | None | None | None | N |
N/W | 0.5265 | ambiguous | 0.4518 | ambiguous | -0.694 | Destabilizing | 0.991 | D | 0.329 | neutral | None | None | None | None | N |
N/Y | 0.1037 | likely_benign | 0.093 | benign | -0.438 | Destabilizing | 0.014 | N | 0.159 | neutral | N | 0.413687061 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.