Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6361 | 19306;19307;19308 | chr2:178728957;178728956;178728955 | chr2:179593684;179593683;179593682 |
N2AB | 6044 | 18355;18356;18357 | chr2:178728957;178728956;178728955 | chr2:179593684;179593683;179593682 |
N2A | 5117 | 15574;15575;15576 | chr2:178728957;178728956;178728955 | chr2:179593684;179593683;179593682 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.92 | N | 0.495 | 0.34 | 0.273503213844 | gnomAD-4.0.0 | 1.59354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43542E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6471 | likely_pathogenic | 0.5592 | ambiguous | -1.669 | Destabilizing | 0.863 | D | 0.476 | neutral | None | None | None | None | N |
R/C | 0.3215 | likely_benign | 0.2749 | benign | -1.45 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
R/D | 0.8503 | likely_pathogenic | 0.7794 | pathogenic | -0.318 | Destabilizing | 0.884 | D | 0.561 | neutral | None | None | None | None | N |
R/E | 0.5225 | ambiguous | 0.4645 | ambiguous | -0.131 | Destabilizing | 0.17 | N | 0.185 | neutral | None | None | None | None | N |
R/F | 0.6646 | likely_pathogenic | 0.5675 | pathogenic | -1.178 | Destabilizing | 0.997 | D | 0.627 | neutral | None | None | None | None | N |
R/G | 0.5425 | ambiguous | 0.4518 | ambiguous | -2.023 | Highly Destabilizing | 0.959 | D | 0.559 | neutral | N | 0.490745666 | None | None | N |
R/H | 0.1352 | likely_benign | 0.1179 | benign | -2.042 | Highly Destabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | N |
R/I | 0.334 | likely_benign | 0.273 | benign | -0.67 | Destabilizing | 0.996 | D | 0.642 | neutral | N | 0.476819472 | None | None | N |
R/K | 0.1226 | likely_benign | 0.1156 | benign | -1.134 | Destabilizing | 0.061 | N | 0.165 | neutral | N | 0.385850751 | None | None | N |
R/L | 0.3536 | ambiguous | 0.2887 | benign | -0.67 | Destabilizing | 0.969 | D | 0.557 | neutral | None | None | None | None | N |
R/M | 0.4006 | ambiguous | 0.3393 | benign | -0.983 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
R/N | 0.7038 | likely_pathogenic | 0.6137 | pathogenic | -0.822 | Destabilizing | 0.969 | D | 0.459 | neutral | None | None | None | None | N |
R/P | 0.863 | likely_pathogenic | 0.7953 | pathogenic | -0.987 | Destabilizing | 0.997 | D | 0.636 | neutral | None | None | None | None | N |
R/Q | 0.1388 | likely_benign | 0.1252 | benign | -0.895 | Destabilizing | 0.939 | D | 0.447 | neutral | None | None | None | None | N |
R/S | 0.6849 | likely_pathogenic | 0.5901 | pathogenic | -1.835 | Destabilizing | 0.92 | D | 0.495 | neutral | N | 0.477472833 | None | None | N |
R/T | 0.4184 | ambiguous | 0.3334 | benign | -1.429 | Destabilizing | 0.959 | D | 0.479 | neutral | N | 0.438493158 | None | None | N |
R/V | 0.4829 | ambiguous | 0.4186 | ambiguous | -0.987 | Destabilizing | 0.969 | D | 0.616 | neutral | None | None | None | None | N |
R/W | 0.2594 | likely_benign | 0.2146 | benign | -0.633 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
R/Y | 0.4619 | ambiguous | 0.384 | ambiguous | -0.469 | Destabilizing | 0.997 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.