Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6364 | 19315;19316;19317 | chr2:178728948;178728947;178728946 | chr2:179593675;179593674;179593673 |
N2AB | 6047 | 18364;18365;18366 | chr2:178728948;178728947;178728946 | chr2:179593675;179593674;179593673 |
N2A | 5120 | 15583;15584;15585 | chr2:178728948;178728947;178728946 | chr2:179593675;179593674;179593673 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | D | 0.9 | 0.649 | 0.85943983745 | gnomAD-4.0.0 | 6.85015E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00113E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8653 | likely_pathogenic | 0.8436 | pathogenic | -1.39 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
C/D | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -1.508 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
C/E | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
C/F | 0.676 | likely_pathogenic | 0.7322 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.56927139 | None | None | N |
C/G | 0.8275 | likely_pathogenic | 0.808 | pathogenic | -1.718 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.570792327 | None | None | N |
C/H | 0.9961 | likely_pathogenic | 0.9961 | pathogenic | -1.842 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
C/I | 0.7727 | likely_pathogenic | 0.7528 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
C/K | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
C/L | 0.6986 | likely_pathogenic | 0.6763 | pathogenic | -0.49 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
C/M | 0.9124 | likely_pathogenic | 0.9065 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
C/N | 0.9958 | likely_pathogenic | 0.9949 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
C/P | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
C/Q | 0.9979 | likely_pathogenic | 0.9976 | pathogenic | -0.953 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
C/R | 0.9948 | likely_pathogenic | 0.9945 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.570792327 | None | None | N |
C/S | 0.936 | likely_pathogenic | 0.9266 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.570792327 | None | None | N |
C/T | 0.9565 | likely_pathogenic | 0.9489 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
C/V | 0.6503 | likely_pathogenic | 0.6165 | pathogenic | -0.772 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
C/W | 0.9821 | likely_pathogenic | 0.9863 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.570792327 | None | None | N |
C/Y | 0.9506 | likely_pathogenic | 0.959 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.570792327 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.