Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6366 | 19321;19322;19323 | chr2:178728942;178728941;178728940 | chr2:179593669;179593668;179593667 |
N2AB | 6049 | 18370;18371;18372 | chr2:178728942;178728941;178728940 | chr2:179593669;179593668;179593667 |
N2A | 5122 | 15589;15590;15591 | chr2:178728942;178728941;178728940 | chr2:179593669;179593668;179593667 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 1.0 | D | 0.87 | 0.727 | 0.740168519677 | gnomAD-4.0.0 | 6.85068E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88366E-05 | 0 | 0 | 0 | 0 |
A/G | None | None | 0.999 | D | 0.623 | 0.631 | 0.57723927602 | gnomAD-4.0.0 | 6.85068E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00155E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8791 | likely_pathogenic | 0.8492 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/D | 0.9952 | likely_pathogenic | 0.9966 | pathogenic | -2.788 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.638071963 | None | None | N |
A/E | 0.9846 | likely_pathogenic | 0.9877 | pathogenic | -2.58 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/F | 0.9164 | likely_pathogenic | 0.9342 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
A/G | 0.3625 | ambiguous | 0.4017 | ambiguous | -2.061 | Highly Destabilizing | 0.999 | D | 0.623 | neutral | D | 0.592396247 | None | None | N |
A/H | 0.9957 | likely_pathogenic | 0.9964 | pathogenic | -2.157 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
A/I | 0.5368 | ambiguous | 0.4945 | ambiguous | -0.339 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/K | 0.9964 | likely_pathogenic | 0.9971 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/L | 0.5462 | ambiguous | 0.522 | ambiguous | -0.339 | Destabilizing | 0.994 | D | 0.671 | neutral | None | None | None | None | N |
A/M | 0.7473 | likely_pathogenic | 0.7406 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
A/N | 0.9874 | likely_pathogenic | 0.9895 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
A/P | 0.9864 | likely_pathogenic | 0.9887 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.612332047 | None | None | N |
A/Q | 0.9806 | likely_pathogenic | 0.9838 | pathogenic | -1.655 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/R | 0.9883 | likely_pathogenic | 0.9901 | pathogenic | -1.502 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
A/S | 0.5016 | ambiguous | 0.5243 | ambiguous | -2.266 | Highly Destabilizing | 0.998 | D | 0.633 | neutral | D | 0.605195664 | None | None | N |
A/T | 0.5685 | likely_pathogenic | 0.5598 | ambiguous | -1.942 | Destabilizing | 0.996 | D | 0.647 | neutral | D | 0.599886237 | None | None | N |
A/V | 0.2517 | likely_benign | 0.2276 | benign | -0.72 | Destabilizing | 0.767 | D | 0.349 | neutral | D | 0.527640656 | None | None | N |
A/W | 0.9956 | likely_pathogenic | 0.9963 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
A/Y | 0.9816 | likely_pathogenic | 0.9857 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.