Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6367 | 19324;19325;19326 | chr2:178728939;178728938;178728937 | chr2:179593666;179593665;179593664 |
N2AB | 6050 | 18373;18374;18375 | chr2:178728939;178728938;178728937 | chr2:179593666;179593665;179593664 |
N2A | 5123 | 15592;15593;15594 | chr2:178728939;178728938;178728937 | chr2:179593666;179593665;179593664 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs769617600 | 0.037 | 0.642 | N | 0.338 | 0.262 | 0.236890367714 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
K/N | rs769617600 | 0.037 | 0.642 | N | 0.338 | 0.262 | 0.236890367714 | gnomAD-4.0.0 | 1.30189E-05 | None | None | None | None | I | None | 0 | 2.24487E-05 | None | 0 | 0 | None | 0 | 0 | 1.62051E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.336 | likely_benign | 0.3183 | benign | -0.565 | Destabilizing | 0.176 | N | 0.375 | neutral | None | None | None | None | I |
K/C | 0.7229 | likely_pathogenic | 0.7077 | pathogenic | -0.715 | Destabilizing | 0.995 | D | 0.481 | neutral | None | None | None | None | I |
K/D | 0.6742 | likely_pathogenic | 0.66 | pathogenic | -0.327 | Destabilizing | 0.543 | D | 0.439 | neutral | None | None | None | None | I |
K/E | 0.1391 | likely_benign | 0.1357 | benign | -0.255 | Destabilizing | 0.023 | N | 0.125 | neutral | N | 0.486516391 | None | None | I |
K/F | 0.7542 | likely_pathogenic | 0.73 | pathogenic | -0.52 | Destabilizing | 0.893 | D | 0.529 | neutral | None | None | None | None | I |
K/G | 0.4847 | ambiguous | 0.4728 | ambiguous | -0.884 | Destabilizing | 0.704 | D | 0.473 | neutral | None | None | None | None | I |
K/H | 0.3491 | ambiguous | 0.3341 | benign | -1.296 | Destabilizing | 0.981 | D | 0.478 | neutral | None | None | None | None | I |
K/I | 0.357 | ambiguous | 0.328 | benign | 0.239 | Stabilizing | 0.543 | D | 0.512 | neutral | None | None | None | None | I |
K/L | 0.4073 | ambiguous | 0.3863 | ambiguous | 0.239 | Stabilizing | 0.329 | N | 0.486 | neutral | None | None | None | None | I |
K/M | 0.2284 | likely_benign | 0.2114 | benign | 0.261 | Stabilizing | 0.139 | N | 0.285 | neutral | N | 0.493280561 | None | None | I |
K/N | 0.4746 | ambiguous | 0.4561 | ambiguous | -0.429 | Destabilizing | 0.642 | D | 0.338 | neutral | N | 0.494735365 | None | None | I |
K/P | 0.9708 | likely_pathogenic | 0.9724 | pathogenic | 0.001 | Stabilizing | 0.828 | D | 0.491 | neutral | None | None | None | None | I |
K/Q | 0.1131 | likely_benign | 0.1085 | benign | -0.649 | Destabilizing | 0.642 | D | 0.428 | neutral | N | 0.493559793 | None | None | I |
K/R | 0.0799 | likely_benign | 0.0784 | benign | -0.51 | Destabilizing | 0.642 | D | 0.365 | neutral | N | 0.521746472 | None | None | I |
K/S | 0.3567 | ambiguous | 0.345 | ambiguous | -1.091 | Destabilizing | 0.085 | N | 0.125 | neutral | None | None | None | None | I |
K/T | 0.1479 | likely_benign | 0.1381 | benign | -0.828 | Destabilizing | 0.023 | N | 0.186 | neutral | N | 0.474797887 | None | None | I |
K/V | 0.288 | likely_benign | 0.2719 | benign | 0.001 | Stabilizing | 0.013 | N | 0.229 | neutral | None | None | None | None | I |
K/W | 0.7422 | likely_pathogenic | 0.7319 | pathogenic | -0.372 | Destabilizing | 0.995 | D | 0.512 | neutral | None | None | None | None | I |
K/Y | 0.6397 | likely_pathogenic | 0.6265 | pathogenic | -0.033 | Destabilizing | 0.981 | D | 0.486 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.