Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6368 | 19327;19328;19329 | chr2:178728936;178728935;178728934 | chr2:179593663;179593662;179593661 |
N2AB | 6051 | 18376;18377;18378 | chr2:178728936;178728935;178728934 | chr2:179593663;179593662;179593661 |
N2A | 5124 | 15595;15596;15597 | chr2:178728936;178728935;178728934 | chr2:179593663;179593662;179593661 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs748146062 | -0.828 | 0.999 | N | 0.587 | 0.536 | 0.350964488264 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.69E-05 | 0 |
N/S | rs748146062 | -0.828 | 0.999 | N | 0.587 | 0.536 | 0.350964488264 | gnomAD-4.0.0 | 4.79001E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.60003E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9905 | likely_pathogenic | 0.9879 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/C | 0.9831 | likely_pathogenic | 0.9781 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
N/D | 0.9399 | likely_pathogenic | 0.9349 | pathogenic | -1.299 | Destabilizing | 0.999 | D | 0.624 | neutral | D | 0.55999441 | None | None | N |
N/E | 0.993 | likely_pathogenic | 0.993 | pathogenic | -1.23 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/F | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/G | 0.9668 | likely_pathogenic | 0.9661 | pathogenic | -1.051 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
N/H | 0.9656 | likely_pathogenic | 0.9628 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.549905552 | None | None | N |
N/I | 0.9865 | likely_pathogenic | 0.9817 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.561515347 | None | None | N |
N/K | 0.994 | likely_pathogenic | 0.994 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.560754878 | None | None | N |
N/L | 0.9807 | likely_pathogenic | 0.9763 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/M | 0.9834 | likely_pathogenic | 0.9785 | pathogenic | 0.474 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/P | 0.997 | likely_pathogenic | 0.9975 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
N/Q | 0.9949 | likely_pathogenic | 0.9947 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
N/R | 0.9938 | likely_pathogenic | 0.9943 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
N/S | 0.8112 | likely_pathogenic | 0.7918 | pathogenic | -0.816 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.495286391 | None | None | N |
N/T | 0.93 | likely_pathogenic | 0.9148 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.533749853 | None | None | N |
N/V | 0.9861 | likely_pathogenic | 0.9818 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
N/W | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/Y | 0.9805 | likely_pathogenic | 0.9783 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.561261857 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.