Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6369 | 19330;19331;19332 | chr2:178728933;178728932;178728931 | chr2:179593660;179593659;179593658 |
N2AB | 6052 | 18379;18380;18381 | chr2:178728933;178728932;178728931 | chr2:179593660;179593659;179593658 |
N2A | 5125 | 15598;15599;15600 | chr2:178728933;178728932;178728931 | chr2:179593660;179593659;179593658 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.994 | N | 0.401 | 0.568 | 0.499218193508 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs776552344 | 0.899 | 0.978 | N | 0.473 | 0.317 | 0.409937222855 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
E/K | rs776552344 | 0.899 | 0.978 | N | 0.473 | 0.317 | 0.409937222855 | gnomAD-4.0.0 | 6.85388E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16501E-05 | 0 |
E/Q | rs776552344 | 0.654 | 0.889 | N | 0.396 | 0.193 | 0.415055319159 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
E/Q | rs776552344 | 0.654 | 0.889 | N | 0.396 | 0.193 | 0.415055319159 | gnomAD-4.0.0 | 3.42694E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.5024E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1634 | likely_benign | 0.1594 | benign | 0.003 | Stabilizing | 0.989 | D | 0.484 | neutral | N | 0.49829361 | None | None | I |
E/C | 0.8977 | likely_pathogenic | 0.9121 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/D | 0.096 | likely_benign | 0.1027 | benign | -0.294 | Destabilizing | 0.217 | N | 0.418 | neutral | N | 0.432820766 | None | None | I |
E/F | 0.7902 | likely_pathogenic | 0.8084 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
E/G | 0.2226 | likely_benign | 0.2199 | benign | -0.094 | Destabilizing | 0.994 | D | 0.401 | neutral | N | 0.511204192 | None | None | I |
E/H | 0.5615 | ambiguous | 0.5875 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.494 | neutral | None | None | None | None | I |
E/I | 0.3492 | ambiguous | 0.3688 | ambiguous | 0.195 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
E/K | 0.1912 | likely_benign | 0.2024 | benign | 0.527 | Stabilizing | 0.978 | D | 0.473 | neutral | N | 0.504430148 | None | None | I |
E/L | 0.4832 | ambiguous | 0.5005 | ambiguous | 0.195 | Stabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | I |
E/M | 0.5505 | ambiguous | 0.5652 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.534 | neutral | None | None | None | None | I |
E/N | 0.2738 | likely_benign | 0.3049 | benign | 0.33 | Stabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | I |
E/P | 0.5256 | ambiguous | 0.4938 | ambiguous | 0.148 | Stabilizing | 1.0 | D | 0.479 | neutral | None | None | None | None | I |
E/Q | 0.1972 | likely_benign | 0.2039 | benign | 0.333 | Stabilizing | 0.889 | D | 0.396 | neutral | N | 0.498640326 | None | None | I |
E/R | 0.3419 | ambiguous | 0.352 | ambiguous | 0.634 | Stabilizing | 0.998 | D | 0.487 | neutral | None | None | None | None | I |
E/S | 0.2172 | likely_benign | 0.2306 | benign | 0.209 | Stabilizing | 0.992 | D | 0.476 | neutral | None | None | None | None | I |
E/T | 0.2659 | likely_benign | 0.2696 | benign | 0.298 | Stabilizing | 0.999 | D | 0.443 | neutral | None | None | None | None | I |
E/V | 0.2344 | likely_benign | 0.2396 | benign | 0.148 | Stabilizing | 0.998 | D | 0.495 | neutral | N | 0.518458238 | None | None | I |
E/W | 0.9246 | likely_pathogenic | 0.9331 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
E/Y | 0.6738 | likely_pathogenic | 0.6865 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.