Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6373 | 19342;19343;19344 | chr2:178728921;178728920;178728919 | chr2:179593648;179593647;179593646 |
N2AB | 6056 | 18391;18392;18393 | chr2:178728921;178728920;178728919 | chr2:179593648;179593647;179593646 |
N2A | 5129 | 15610;15611;15612 | chr2:178728921;178728920;178728919 | chr2:179593648;179593647;179593646 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs367868361 | -1.371 | 0.959 | N | 0.503 | 0.264 | None | gnomAD-2.1.1 | 2.16E-05 | None | None | None | None | I | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.94E-05 | 0 |
E/G | rs367868361 | -1.371 | 0.959 | N | 0.503 | 0.264 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/G | rs367868361 | -1.371 | 0.959 | N | 0.503 | 0.264 | None | gnomAD-4.0.0 | 7.39472E-05 | None | None | None | None | I | None | 1.33629E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.8529E-05 | 0 | 3.21151E-05 |
E/K | rs1310419887 | -0.361 | 0.979 | N | 0.395 | 0.33 | 0.339555952218 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2516 | likely_benign | 0.254 | benign | -0.795 | Destabilizing | 0.238 | N | 0.22 | neutral | N | 0.405668663 | None | None | I |
E/C | 0.9451 | likely_pathogenic | 0.9431 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | I |
E/D | 0.2309 | likely_benign | 0.3247 | benign | -1.106 | Destabilizing | 0.068 | N | 0.106 | neutral | N | 0.459580506 | None | None | I |
E/F | 0.9214 | likely_pathogenic | 0.9252 | pathogenic | -0.003 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
E/G | 0.3563 | ambiguous | 0.3871 | ambiguous | -1.21 | Destabilizing | 0.959 | D | 0.503 | neutral | N | 0.51770609 | None | None | I |
E/H | 0.7641 | likely_pathogenic | 0.7968 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.455 | neutral | None | None | None | None | I |
E/I | 0.6977 | likely_pathogenic | 0.7062 | pathogenic | 0.356 | Stabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | I |
E/K | 0.4098 | ambiguous | 0.4569 | ambiguous | -0.572 | Destabilizing | 0.979 | D | 0.395 | neutral | N | 0.474029883 | None | None | I |
E/L | 0.7122 | likely_pathogenic | 0.7276 | pathogenic | 0.356 | Stabilizing | 0.969 | D | 0.575 | neutral | None | None | None | None | I |
E/M | 0.7413 | likely_pathogenic | 0.7451 | pathogenic | 0.798 | Stabilizing | 1.0 | D | 0.534 | neutral | None | None | None | None | I |
E/N | 0.5165 | ambiguous | 0.5973 | pathogenic | -1.145 | Destabilizing | 0.969 | D | 0.442 | neutral | None | None | None | None | I |
E/P | 0.9803 | likely_pathogenic | 0.9855 | pathogenic | -0.007 | Destabilizing | 0.995 | D | 0.507 | neutral | None | None | None | None | I |
E/Q | 0.2162 | likely_benign | 0.2239 | benign | -0.968 | Destabilizing | 0.979 | D | 0.469 | neutral | N | 0.4090184 | None | None | I |
E/R | 0.5608 | ambiguous | 0.5964 | pathogenic | -0.251 | Destabilizing | 0.995 | D | 0.457 | neutral | None | None | None | None | I |
E/S | 0.3202 | likely_benign | 0.3613 | ambiguous | -1.527 | Destabilizing | 0.864 | D | 0.352 | neutral | None | None | None | None | I |
E/T | 0.437 | ambiguous | 0.428 | ambiguous | -1.173 | Destabilizing | 0.293 | N | 0.244 | neutral | None | None | None | None | I |
E/V | 0.4195 | ambiguous | 0.4238 | ambiguous | -0.007 | Destabilizing | 0.959 | D | 0.539 | neutral | N | 0.439415877 | None | None | I |
E/W | 0.9791 | likely_pathogenic | 0.9818 | pathogenic | 0.285 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
E/Y | 0.8823 | likely_pathogenic | 0.8917 | pathogenic | 0.283 | Stabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.