Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6375 | 19348;19349;19350 | chr2:178728915;178728914;178728913 | chr2:179593642;179593641;179593640 |
N2AB | 6058 | 18397;18398;18399 | chr2:178728915;178728914;178728913 | chr2:179593642;179593641;179593640 |
N2A | 5131 | 15616;15617;15618 | chr2:178728915;178728914;178728913 | chr2:179593642;179593641;179593640 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.98 | N | 0.787 | 0.587 | 0.876617020153 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.466 | ambiguous | 0.4916 | ambiguous | -1.817 | Destabilizing | 0.931 | D | 0.591 | neutral | None | None | None | None | N |
C/D | 0.8871 | likely_pathogenic | 0.9015 | pathogenic | -0.877 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
C/E | 0.9555 | likely_pathogenic | 0.9623 | pathogenic | -0.695 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
C/F | 0.6526 | likely_pathogenic | 0.6949 | pathogenic | -1.043 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.507355437 | None | None | N |
C/G | 0.2421 | likely_benign | 0.267 | benign | -2.164 | Highly Destabilizing | 0.98 | D | 0.787 | deleterious | N | 0.501265824 | None | None | N |
C/H | 0.8621 | likely_pathogenic | 0.8775 | pathogenic | -2.113 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
C/I | 0.8003 | likely_pathogenic | 0.8264 | pathogenic | -0.888 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
C/K | 0.9773 | likely_pathogenic | 0.9806 | pathogenic | -1.165 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
C/L | 0.7898 | likely_pathogenic | 0.8184 | pathogenic | -0.888 | Destabilizing | 0.993 | D | 0.69 | prob.neutral | None | None | None | None | N |
C/M | 0.8495 | likely_pathogenic | 0.8639 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
C/N | 0.6856 | likely_pathogenic | 0.7351 | pathogenic | -1.49 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | N |
C/P | 0.9956 | likely_pathogenic | 0.9958 | pathogenic | -1.175 | Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
C/Q | 0.8889 | likely_pathogenic | 0.9041 | pathogenic | -1.181 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
C/R | 0.8836 | likely_pathogenic | 0.898 | pathogenic | -1.249 | Destabilizing | 0.997 | D | 0.837 | deleterious | N | 0.486680288 | None | None | N |
C/S | 0.2261 | likely_benign | 0.2715 | benign | -1.956 | Destabilizing | 0.659 | D | 0.54 | neutral | N | 0.493575649 | None | None | N |
C/T | 0.4762 | ambiguous | 0.5054 | ambiguous | -1.589 | Destabilizing | 0.971 | D | 0.713 | prob.delet. | None | None | None | None | N |
C/V | 0.6654 | likely_pathogenic | 0.7021 | pathogenic | -1.175 | Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
C/W | 0.9018 | likely_pathogenic | 0.9196 | pathogenic | -1.221 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.495772095 | None | None | N |
C/Y | 0.7716 | likely_pathogenic | 0.8026 | pathogenic | -1.146 | Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.499215136 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.