Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6376 | 19351;19352;19353 | chr2:178728912;178728911;178728910 | chr2:179593639;179593638;179593637 |
N2AB | 6059 | 18400;18401;18402 | chr2:178728912;178728911;178728910 | chr2:179593639;179593638;179593637 |
N2A | 5132 | 15619;15620;15621 | chr2:178728912;178728911;178728910 | chr2:179593639;179593638;179593637 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs747117289 | -0.588 | 0.56 | N | 0.54 | 0.206 | 0.471132149292 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.41E-05 | None | 0 | 0 | 0 |
Y/C | rs747117289 | -0.588 | 0.56 | N | 0.54 | 0.206 | 0.471132149292 | gnomAD-4.0.0 | 1.37537E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.35056E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3905 | ambiguous | 0.3427 | ambiguous | -1.648 | Destabilizing | 0.007 | N | 0.388 | neutral | None | None | None | None | I |
Y/C | 0.1838 | likely_benign | 0.1534 | benign | -0.322 | Destabilizing | 0.56 | D | 0.54 | neutral | N | 0.486516391 | None | None | I |
Y/D | 0.2512 | likely_benign | 0.2069 | benign | -0.008 | Destabilizing | 0.055 | N | 0.537 | neutral | N | 0.433777984 | None | None | I |
Y/E | 0.537 | ambiguous | 0.4867 | ambiguous | 0.024 | Stabilizing | 0.072 | N | 0.515 | neutral | None | None | None | None | I |
Y/F | 0.0832 | likely_benign | 0.0833 | benign | -0.791 | Destabilizing | None | N | 0.198 | neutral | N | 0.377695415 | None | None | I |
Y/G | 0.3977 | ambiguous | 0.3609 | ambiguous | -1.914 | Destabilizing | 0.031 | N | 0.431 | neutral | None | None | None | None | I |
Y/H | 0.1472 | likely_benign | 0.1371 | benign | -0.492 | Destabilizing | 0.56 | D | 0.516 | neutral | N | 0.41013312 | None | None | I |
Y/I | 0.4263 | ambiguous | 0.3805 | ambiguous | -0.888 | Destabilizing | 0.016 | N | 0.403 | neutral | None | None | None | None | I |
Y/K | 0.5884 | likely_pathogenic | 0.5467 | ambiguous | -0.558 | Destabilizing | 0.072 | N | 0.527 | neutral | None | None | None | None | I |
Y/L | 0.4476 | ambiguous | 0.4189 | ambiguous | -0.888 | Destabilizing | 0.007 | N | 0.319 | neutral | None | None | None | None | I |
Y/M | 0.5682 | likely_pathogenic | 0.5322 | ambiguous | -0.535 | Destabilizing | 0.356 | N | 0.538 | neutral | None | None | None | None | I |
Y/N | 0.1476 | likely_benign | 0.1337 | benign | -0.77 | Destabilizing | 0.055 | N | 0.555 | neutral | N | 0.428372164 | None | None | I |
Y/P | 0.8078 | likely_pathogenic | 0.7232 | pathogenic | -1.129 | Destabilizing | 0.356 | N | 0.587 | neutral | None | None | None | None | I |
Y/Q | 0.4169 | ambiguous | 0.3809 | ambiguous | -0.732 | Destabilizing | 0.356 | N | 0.57 | neutral | None | None | None | None | I |
Y/R | 0.4329 | ambiguous | 0.3933 | ambiguous | -0.148 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | I |
Y/S | 0.1231 | likely_benign | 0.1161 | benign | -1.252 | Destabilizing | 0.001 | N | 0.359 | neutral | N | 0.311987711 | None | None | I |
Y/T | 0.2746 | likely_benign | 0.2455 | benign | -1.128 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | I |
Y/V | 0.3098 | likely_benign | 0.2712 | benign | -1.129 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | I |
Y/W | 0.4457 | ambiguous | 0.4109 | ambiguous | -0.621 | Destabilizing | 0.356 | N | 0.543 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.