Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6377 | 19354;19355;19356 | chr2:178728909;178728908;178728907 | chr2:179593636;179593635;179593634 |
N2AB | 6060 | 18403;18404;18405 | chr2:178728909;178728908;178728907 | chr2:179593636;179593635;179593634 |
N2A | 5133 | 15622;15623;15624 | chr2:178728909;178728908;178728907 | chr2:179593636;179593635;179593634 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.984 | N | 0.641 | 0.447 | 0.615206833243 | gnomAD-4.0.0 | 1.37633E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80652E-06 | 0 | 0 |
A/V | None | None | 0.996 | N | 0.659 | 0.39 | 0.645897206421 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8958 | likely_pathogenic | 0.8603 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
A/D | 0.9779 | likely_pathogenic | 0.9801 | pathogenic | -1.203 | Destabilizing | 0.998 | D | 0.866 | deleterious | D | 0.569842319 | None | None | N |
A/E | 0.9895 | likely_pathogenic | 0.9898 | pathogenic | -1.009 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
A/F | 0.978 | likely_pathogenic | 0.977 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
A/G | 0.1238 | likely_benign | 0.1232 | benign | -1.008 | Destabilizing | 0.992 | D | 0.576 | neutral | N | 0.512642718 | None | None | N |
A/H | 0.9905 | likely_pathogenic | 0.9899 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/I | 0.9672 | likely_pathogenic | 0.9637 | pathogenic | 0.739 | Stabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
A/K | 0.9963 | likely_pathogenic | 0.9966 | pathogenic | -0.485 | Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
A/L | 0.9294 | likely_pathogenic | 0.9258 | pathogenic | 0.739 | Stabilizing | 0.997 | D | 0.775 | deleterious | None | None | None | None | N |
A/M | 0.9498 | likely_pathogenic | 0.9458 | pathogenic | 0.509 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/N | 0.9586 | likely_pathogenic | 0.9603 | pathogenic | -0.717 | Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
A/P | 0.9912 | likely_pathogenic | 0.9904 | pathogenic | 0.363 | Stabilizing | 0.999 | D | 0.871 | deleterious | D | 0.569842319 | None | None | N |
A/Q | 0.9797 | likely_pathogenic | 0.9808 | pathogenic | -0.484 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
A/R | 0.9861 | likely_pathogenic | 0.9869 | pathogenic | -0.779 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
A/S | 0.1697 | likely_benign | 0.1688 | benign | -1.186 | Destabilizing | 0.916 | D | 0.377 | neutral | N | 0.499525213 | None | None | N |
A/T | 0.5829 | likely_pathogenic | 0.5568 | ambiguous | -0.85 | Destabilizing | 0.984 | D | 0.641 | neutral | N | 0.497790466 | None | None | N |
A/V | 0.8422 | likely_pathogenic | 0.8293 | pathogenic | 0.363 | Stabilizing | 0.996 | D | 0.659 | neutral | N | 0.488556847 | None | None | N |
A/W | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
A/Y | 0.9896 | likely_pathogenic | 0.9882 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.